RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 DPEP2Q9H4A9 486 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 TUBB1Q9H4B7 451 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 PARVBQ9HBI1 364 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 CYP4F12Q9HCS2 524 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 PREBQ9HCU5 417 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 TCF7L2Q9NQB0 619 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 DYRK4Q9NR20 520 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 HEBP1Q9NRV9 189 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 KLC4Q9NSK0 619 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 TXLNGQ9NUQ3 528 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 MRGBPQ9NV56 204 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 ARL8BQ9NVJ2 186 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 TMEM45AQ9NWC5 275 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 MARCOQ9UEW3 520 aaPredicted RBP6.66□□□□□ -1.34
MSH5-217ENST00000494458 PDE10AQ9Y233 779 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 FNDC3AQ9Y2H6 1198 aaKnown RBP6.66□□□□□ -1.34
MSH5-217ENST00000494458 ASB1Q9Y576 335 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 DNAJC15Q9Y5T4 150 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 TICRRQ7Z2Z1 1910 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 LRRK1Q38SD2 2015 aa6.66□□□□□ -1.34
MSH5-217ENST00000494458 MGAT4DA6NG13 374 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 TMEM202A6NGA9 273 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 IGLON5A6NGN9 336 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 TMEM233B4DJY2 109 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 MYO1CO00159 1063 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 OR7A17O14581 309 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 AZIN1O14977 448 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 LZTS3O60299 673 aaPredicted RBP6.65□□□□□ -1.34
MSH5-217ENST00000494458 SYNCRIPO60506 623 aaKnown RBP6.65□□□□□ -1.34
MSH5-217ENST00000494458 KCNJ13O60928 360 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 ATG13O75143 517 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 KITP10721 976 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 UROSP10746 265 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 CHRNB1P11230 501 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 GFAPP14136 432 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 VCLP18206 1134 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 EPORP19235 508 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 CALB2P22676 271 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 IGFBP4P22692 258 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 PTPN4P29074 926 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 PRDX3P30048 256 aaKnown RBP6.65□□□□□ -1.34
MSH5-217ENST00000494458 CPOXP36551 454 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 GPR1P46091 355 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 PSMD8P48556 350 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 AGTR2P50052 363 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 RASSF2P50749 326 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 ATP4BP51164 291 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 CDH13P55290 713 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 RPS21P63220 83 aaKnown RBP6.65□□□□□ -1.34
MSH5-217ENST00000494458 DMPKQ09013 629 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 SF3A3Q12874 501 aaKnown RBP eCLIP6.65□□□□□ -1.343e-13■■■■□ 21.7
MSH5-217ENST00000494458 TRAF3Q13114 568 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 RPA4Q13156 261 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 TDGQ13569 410 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 PTK2BQ14289 1009 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 NAA25Q14CX7 972 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 LAPTM4AQ15012 233 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 HERC3Q15034 1050 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 SMU1Q2TAY7 513 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 PUS10Q3MIT2 529 aaKnown RBP6.65□□□□□ -1.34
MSH5-217ENST00000494458 GGTA1PQ4G0N0 100 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 XKR7Q5GH72 579 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 VWA5B1Q5TIE3 1220 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 TMEM220Q6QAJ8 160 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.65□□□□□ -1.34
MSH5-217ENST00000494458 RPS27LQ71UM5 84 aaKnown RBP6.65□□□□□ -1.34
MSH5-217ENST00000494458 SYVN1Q86TM6 617 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 TCAIMQ8N3R3 496 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 HDDC3Q8N4P3 179 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 PLA2G15Q8NCC3 412 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 OR56A4Q8NGH8 313 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 OR2L2Q8NH16 312 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 CXorf40AQ8TE69 158 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 NAT14Q8WUY8 206 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 HLA-CQ95604 372 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 UTP4Q969X6 686 aaKnown RBP6.65□□□□□ -1.34
MSH5-217ENST00000494458 FBXL8Q96CD0 374 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 HIC2Q96JB3 615 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 MRGPRX1Q96LB2 322 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 CDX2Q99626 313 aaPredicted RBP6.65□□□□□ -1.34
MSH5-217ENST00000494458 CD244Q9BZW8 370 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 ZCCHC2Q9C0B9 1178 aaKnown RBP6.65□□□□□ -1.34
MSH5-217ENST00000494458 TWSG1Q9GZX9 223 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 SARS2Q9NP81 518 aaKnown RBP6.65□□□□□ -1.34
MSH5-217ENST00000494458 ZDHHC4Q9NPG8 344 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 ITM2CQ9NQX7 267 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 ACSS2Q9NR19 701 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 TAS2R1Q9NYW7 299 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 ATXN10Q9UBB4 475 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 MMP17Q9ULZ9 603 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 SLC17A4Q9Y2C5 497 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 STK38LQ9Y2H1 464 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 COQ6Q9Y2Z9 468 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 CCL27Q9Y4X3 112 aa6.65□□□□□ -1.34
MSH5-217ENST00000494458 PIKFYVEQ9Y2I7 2098 aa6.65□□□□□ -1.35
MSH5-217ENST00000494458 A0A1W2PP55 124 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 PRR5-ARHGAP8B1AHC4 643 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 SUPT3HB4E1H0 165 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 K7EPI3 171 aa6.64□□□□□ -1.35
MSH5-217ENST00000494458 MAN2B1O00754 1011 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms