RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 MPP1Q00013 466 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 PLOD1Q02809 727 aaPredicted RBP13.23□□□□□ -0.29
COL1A1-208ENST00000494334 CFHR1Q03591 330 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 HSPA14Q0VDF9 509 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 CAMK2BQ13554 666 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 GPR18Q14330 331 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 FRG1Q14331 258 aaKnown RBP13.23□□□□□ -0.29
COL1A1-208ENST00000494334 ISXQ2M1V0 245 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 TEDDM1Q5T9Z0 273 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 DUS1LQ6P1R4 473 aaKnown RBP13.23□□□□□ -0.29
COL1A1-208ENST00000494334 ZNF449Q6P9G9 518 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 GSDMBQ8TAX9 411 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 TMEM159Q96B96 161 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 DEPDC7Q96QD5 511 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 PHACTR1Q9C0D0 580 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 L2HGDHQ9H9P8 463 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 RDH14Q9HBH5 336 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 PPANQ9NQ55 473 aaKnown RBP13.23□□□□□ -0.29
COL1A1-208ENST00000494334 FAM114A2Q9NRY5 505 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 ZDHHC18Q9NUE0 388 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 MOCS1Q9NZB8 636 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 CDYLQ9Y232 598 aa13.23□□□□□ -0.29
COL1A1-208ENST00000494334 NCOR2Q9Y618 2525 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 H3BMM5 538 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 NIPSNAP2O75323 286 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 HOXB3P14651 431 aaPredicted RBP13.22□□□□□ -0.29
COL1A1-208ENST00000494334 CHRM3P20309 590 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 ACADLP28330 430 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 GABRB3P28472 473 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 CSE1LP55060 971 aaKnown RBP13.22□□□□□ -0.29
COL1A1-208ENST00000494334 ZFP36L1Q07352 338 aaKnown RBP13.22□□□□□ -0.29
COL1A1-208ENST00000494334 CLPPQ16740 277 aaPredicted RBP13.22□□□□□ -0.29
COL1A1-208ENST00000494334 SYTL3Q4VX76 610 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 ZNF549Q6P9A3 640 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 CNSTQ6PJW8 725 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 ZNF574Q6ZN55 896 aaPredicted RBP13.22□□□□□ -0.29
COL1A1-208ENST00000494334 B3GNT8Q7Z7M8 397 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 PDZD3Q86UT5 571 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 PIM3Q86V86 326 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 VRK3Q8IV63 474 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 PALM2Q8IXS6 379 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 OR10G6Q8NH81 332 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 GABPB2Q8TAK5 448 aaPredicted RBP13.22□□□□□ -0.29
COL1A1-208ENST00000494334 ZFPM2Q8WW38 1151 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 ASZ1Q8WWH4 475 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 TFGQ92734 400 aaPredicted RBP13.22□□□□□ -0.29
COL1A1-208ENST00000494334 AHCYL2Q96HN2 611 aaKnown RBP13.22□□□□□ -0.29
COL1A1-208ENST00000494334 NUDT22Q9BRQ3 303 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 FOXP3Q9BZS1 431 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 SLC17A6Q9P2U8 582 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 GALPQ9UBC7 116 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 ENTPD2Q9Y5L3 495 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 COLEC10Q9Y6Z7 277 aa13.22□□□□□ -0.29
COL1A1-208ENST00000494334 KNTC1P50748 2209 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 ESPNB1AK53 854 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 KPNA5O15131 536 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 DUX1O43812 170 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 UBXN7O94888 489 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 SLCO2B1O94956 709 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 AHSGP02765 367 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 APOA4P06727 396 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 SSTR1P30872 391 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 CSF2RBP32927 897 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 MAGEA4P43358 317 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 MAPK9P45984 424 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 INHBCP55103 352 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 MAP9Q49MG5 647 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 DNTTIP2Q5QJE6 756 aaKnown RBP13.21□□□□□ -0.29
COL1A1-208ENST00000494334 TMEM71Q6P5X7 295 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 CAPN12Q6ZSI9 719 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 KIAA0408Q6ZU52 694 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 OTOAQ7RTW8 1153 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 GALNT7Q86SF2 657 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 CCDC25Q86WR0 208 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 SLITRK4Q8IW52 837 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 SLC22A15Q8IZD6 547 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 LRRN4CLQ8ND94 238 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 PHC3Q8NDX5 983 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 JPH3Q8WXH2 748 aaPredicted RBP13.21□□□□□ -0.29
COL1A1-208ENST00000494334 NCSTNQ92542 709 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 FAM136AQ96C01 138 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 GRAMD1AQ96CP6 724 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 ATXN7L3BQ96GX2 97 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 C9orf72Q96LT7 481 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 FERD3LQ96RJ6 166 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 SEMA6CQ9H3T2 930 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 KIR3DX1Q9H7L2 352 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 LATS2Q9NRM7 1088 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 OGFRQ9NZT2 677 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 TMEM9Q9P0T7 183 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 MED16Q9Y2X0 877 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 HEBP2Q9Y5Z4 205 aa13.21□□□□□ -0.29
COL1A1-208ENST00000494334 PTPRBP23467 1997 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 TRABD2BA6NFA1 517 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 E5RI56 91 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 PROS1P07225 676 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 TYRP1P17643 537 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 AMD1P17707 334 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 MPSTP25325 297 aa13.2□□□□□ -0.3
COL1A1-208ENST00000494334 NDUFS1P28331 727 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms