RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 ITPKBP27987 946 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 STAT5AP42229 794 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 ABCG1P45844 678 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 POLD2P49005 469 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 DYNLT1P63172 113 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 CCL7P80098 99 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 DPTQ07507 201 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 ILF3Q12906 894 aaKnown RBP eCLIP8.02□□□□□ -1.13
RIF1-211ENST00000494333 ZBTB17Q13105 803 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 PDK1Q15118 436 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 LLGL1Q15334 1064 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 TBC1D25Q3MII6 688 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 C3orf38Q5JPI3 329 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 DOK6Q6PKX4 331 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 MFSD7Q6UXD7 560 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 OVCH1Q7RTY7 1134 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 KDELC2Q7Z4H8 507 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 B3GNT8Q7Z7M8 397 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 VSIG1Q86XK7 387 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 PTRH1Q86Y79 214 aaKnown RBP8.02□□□□□ -1.13
RIF1-211ENST00000494333 Q8N9G6 341 aaPredicted RBP8.02□□□□□ -1.13
RIF1-211ENST00000494333 OR6C4Q8NGE1 309 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 GRAMD1AQ96CP6 724 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 AGAP3Q96P47 875 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 GFM1Q96RP9 751 aaKnown RBP8.02□□□□□ -1.13
RIF1-211ENST00000494333 AGAP2Q99490 1192 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 YIPF4Q9BSR8 244 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 MLPHQ9BV36 600 aaPredicted RBP8.02□□□□□ -1.13
RIF1-211ENST00000494333 SPATS2LQ9NUQ6 558 aaKnown RBP8.02□□□□□ -1.13
RIF1-211ENST00000494333 DDX56Q9NY93 547 aaKnown RBP8.02□□□□□ -1.13
RIF1-211ENST00000494333 SEPT10Q9P0V9 454 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 SAMD15Q9P1V8 674 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 LRIT1Q9P2V4 623 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 CNOT6Q9ULM6 557 aaKnown RBP8.02□□□□□ -1.13
RIF1-211ENST00000494333 SUFUQ9UMX1 484 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 SRPK3Q9UPE1 567 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 SATB2Q9UPW6 733 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 PLAAQ9Y263 795 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 TMEM98Q9Y2Y6 226 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 ALG6Q9Y672 507 aa8.02□□□□□ -1.13
RIF1-211ENST00000494333 URB1O60287 2271 aaKnown RBP8.02□□□□□ -1.13
RIF1-211ENST00000494333 C1orf232A0A0U1RR37 186 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 A0A1W2PNU3 283 aaPredicted RBP8.01□□□□□ -1.13
RIF1-211ENST00000494333 A0A1W2PQM1 296 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 CAPN8A6NHC0 703 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 B4DGG1 531 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 NPIPB6E9PJ23 425 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 NTN3O00634 580 aaPredicted RBP8.01□□□□□ -1.13
RIF1-211ENST00000494333 INPP4BO15327 924 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 NOBOXO60393 691 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 ZRANB2O95218 330 aaKnown RBP eCLIP8.01□□□□□ -1.13
RIF1-211ENST00000494333 SOD1P00441 154 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 RPLP0P05388 317 aaKnown RBP8.01□□□□□ -1.13
RIF1-211ENST00000494333 MMP2P08253 660 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 PI3P19957 117 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 AK4P27144 223 aaPredicted RBP8.01□□□□□ -1.13
RIF1-211ENST00000494333 TEAD1P28347 426 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 RBMS1P29558 406 aaKnown RBP8.01□□□□□ -1.13
RIF1-211ENST00000494333 GNPDA1P46926 289 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 LIMS1P48059 325 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 NR2C2P49116 596 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 STC1P52823 247 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 GYS2P54840 703 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 LINC00310P59036 64 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 ERVPABLB-1P60509 514 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 RPL26P61254 145 aaKnown RBP8.01□□□□□ -1.13
RIF1-211ENST00000494333 IFI35P80217 286 aaPredicted RBP8.01□□□□□ -1.13
RIF1-211ENST00000494333 CCDC173Q0VFZ6 552 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 SPA17Q15506 151 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 C14orf28Q4W4Y0 310 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 TEX44Q53QW1 395 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 KAZNQ674X7 775 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 SLC30A9Q6PML9 568 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 CD300LDQ6UXZ3 194 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 MARK2Q7KZI7 788 aaKnown RBP8.01□□□□□ -1.13
RIF1-211ENST00000494333 BZW1Q7L1Q6 419 aaKnown RBP8.01□□□□□ -1.13
RIF1-211ENST00000494333 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.01□□□□□ -1.13
RIF1-211ENST00000494333 TRIM74Q86UV6 250 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 NT5DC3Q86UY8 548 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 NRROSQ86YC3 692 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 CCDC170Q8IYT3 715 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 EXD1Q8NHP7 514 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 CCHCR1Q8TD31 782 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 NAF1Q96HR8 494 aaKnown RBP8.01□□□□□ -1.13
RIF1-211ENST00000494333 HIC2Q96JB3 615 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 ZNF578Q96N58 590 aaPredicted RBP8.01□□□□□ -1.13
RIF1-211ENST00000494333 SLC46A1Q96NT5 459 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 OLFM3Q96PB7 478 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 LYSMD1Q96S90 227 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 RIOK2Q9BVS4 552 aaKnown RBP8.01□□□□□ -1.13
RIF1-211ENST00000494333 ADGRE3Q9BY15 652 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 GSDMCQ9BYG8 508 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 FRMD8Q9BZ67 464 aaPredicted RBP8.01□□□□□ -1.13
RIF1-211ENST00000494333 BRD8Q9H0E9 1235 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 LRRN3Q9H3W5 708 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 GOLPH3Q9H4A6 298 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 SMURF1Q9HCE7 757 aa8.01□□□□□ -1.13
RIF1-211ENST00000494333 TRNAU1APQ9NX07 287 aaKnown RBP8.01□□□□□ -1.13
RIF1-211ENST00000494333 SAE1Q9UBE0 346 aaPredicted RBP8.01□□□□□ -1.13
RIF1-211ENST00000494333 DNPEPQ9ULA0 475 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms