RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PCDHB16Q9NRJ7 776 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 ARL8BQ9NVJ2 186 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 MIOSQ9NXC5 875 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 KIAA1522Q9P206 1035 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-221ENST00000493795 GLYATL1P3A0A0U1RQE8 302 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 TVP23AA6NH52 213 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 GRM6O15303 877 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 FGF19O95750 216 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 IFNA10P01566 189 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 ALPPP05187 535 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 BCKDHAP12694 445 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 TCEA1P23193 301 aaKnown RBP7.76□□□□□ -1.17
BRCA1-221ENST00000493795 MPSTP25325 297 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 PSEN2P49810 448 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 SLC5A3P53794 718 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 TAS2R50P59544 299 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 RAB5BP61020 215 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 SMARCB1Q12824 385 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 PGM5Q15124 567 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 MINDY4Q4G0A6 757 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 STYK1Q6J9G0 422 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 DNM1P34Q6PK57 102 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 P4HA3Q7Z4N8 544 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 C7orf61Q8IZ16 206 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 CBR4Q8N4T8 237 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 COX18Q8N8Q8 333 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 LPGAT1Q92604 370 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 AZIN2Q96A70 460 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 LIN37Q96GY3 246 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-221ENST00000493795 RGCCQ9H4X1 137 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 SERINC1Q9NRX5 453 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 PTTG2Q9NZH5 202 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 SLC22A1O15245 554 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 COL6A2P12110 1019 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 CD83Q01151 205 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 ST3GAL4Q11206 333 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 MERTKQ12866 999 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 FASTKD3Q14CZ7 662 aaKnown RBP7.76□□□□□ -1.17
BRCA1-221ENST00000493795 LY6KQ17RY6 165 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 RBM48Q5RL73 367 aaKnown RBP7.76□□□□□ -1.17
BRCA1-221ENST00000493795 ATAT1Q5SQI0 421 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 ZER1Q7Z7L7 766 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 SAMD14Q8IZD0 417 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-221ENST00000493795 C12orf50Q8NA57 414 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-221ENST00000493795 ANKRD52Q8NB46 1076 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 TMEM145Q8NBT3 493 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 MFSD8Q8NHS3 518 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 SMARCD2Q92925 531 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 PIWIL1Q96J94 861 aaKnown RBP7.76□□□□□ -1.17
BRCA1-221ENST00000493795 FUZQ9BT04 418 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 GDAP2Q9NXN4 497 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 KCNN3Q9UGI6 736 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 MAGEB17A8MXT2 336 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 GPR89AB7ZAQ6 455 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 UBE2Q2LH0YL09 131 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 BANF1O75531 89 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 RP2O75695 350 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 TM7SF2O76062 418 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 CTDNEP1O95476 244 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 SLC16A8O95907 504 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 GPR89BP0CG08 455 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 AKR1A1P14550 325 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 CFL1P23528 166 aaKnown RBP7.76□□□□□ -1.17
BRCA1-221ENST00000493795 LCN1P31025 176 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 CASRP41180 1078 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 SLC9A3P48764 834 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 CDH13P55290 713 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 PSMA6P60900 246 aaKnown RBP7.76□□□□□ -1.17
BRCA1-221ENST00000493795 HSPB3Q12988 150 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 SGCBQ16585 318 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 TIGD6Q17RP2 521 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 HECTD2Q5U5R9 776 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 GARNL3Q5VVW2 1013 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 XKRXQ6PP77 449 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 ZNF550Q7Z398 422 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 CNTD1Q8N815 330 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 SLC37A3Q8NCC5 494 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 PROKR2Q8NFJ6 384 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 C9orf43Q8TAL5 461 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-221ENST00000493795 SMPDL3BQ92485 455 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 PCDHGB6Q9Y5F9 930 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 SPIN1Q9Y657 262 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-221ENST00000493795 FAM205AQ6ZU69 1335 aa7.76□□□□□ -1.17
BRCA1-221ENST00000493795 CLCA1A8K7I4 914 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 H0YGN5 161 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 hCG_2039718K7EN88 272 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 EDF1O60869 148 aaKnown RBP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 OAZ2O95190 189 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 UGT2B4P06133 528 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 CSTF2P33240 577 aaKnown RBP eCLIP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 CREB5Q02930 508 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 GNA12Q03113 381 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 KCTD9Q7L273 389 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 CYP2U1Q7Z449 544 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 LHFPL3Q86UP9 236 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 ROPN1LQ96C74 230 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 C8orf48Q96LL4 319 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 SSX3Q99909 188 aa7.75□□□□□ -1.17
BRCA1-221ENST00000493795 POLR2J2Q9GZM3 115 aaKnown RBP7.75□□□□□ -1.17
BRCA1-221ENST00000493795 RHOJQ9H4E5 214 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms