RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 JRKO75564 520 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 SLC25A12O75746 678 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 LIFP15018 202 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 ALOX12P18054 663 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 GABRB1P18505 474 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 UGT1A1P22309 533 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 UBA1P22314 1058 aaKnown RBP3.65□□□□□ -1.83
SMC4-223ENST00000493695 HOXC9P31274 260 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 CD81P60033 236 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 MS4A2Q01362 244 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 RIGQ13278 110 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 IRF3Q14653 427 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 CRYMQ14894 314 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 ITPRIPL1Q6GPH6 555 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 CFAP77Q6ZQR2 320 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 PDILTQ8N807 584 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 TMEM178AQ8NBL3 297 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 TRPC4APQ8TEL6 797 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 ZNRF4Q8WWF5 429 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 SEMA4DQ92854 862 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 RRNAD1Q96FB5 475 aaKnown RBP3.65□□□□□ -1.83
SMC4-223ENST00000493695 CMTM3Q96MX0 182 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 PKP2Q99959 881 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 MAGIXQ9H6Y5 334 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 ZNF71Q9NQZ8 489 aaPredicted RBP3.65□□□□□ -1.83
SMC4-223ENST00000493695 UBA2Q9UBT2 640 aaPredicted RBP3.65□□□□□ -1.83
SMC4-223ENST00000493695 GPR34Q9UPC5 381 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 MTMR6Q9Y217 621 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 RABGAP1Q9Y3P9 1069 aa3.65□□□□□ -1.83
SMC4-223ENST00000493695 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 C15orf62A8K5M9 175 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.64□□□□□ -1.83
SMC4-223ENST00000493695 K7ENM7 598 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 VILLO15195 856 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 GFPT2O94808 682 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 WNT5AP41221 380 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 MRPS34P82930 218 aaKnown RBP3.64□□□□□ -1.83
SMC4-223ENST00000493695 CREB5Q02930 508 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 PLEKHS1Q5SXH7 462 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 GKAP1Q5VSY0 366 aaPredicted RBP3.64□□□□□ -1.83
SMC4-223ENST00000493695 LCN10Q6JVE6 187 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 TMEM154Q6P9G4 183 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 TICAM1Q8IUC6 712 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 FBXL16Q8N461 479 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 ZNF611Q8N823 705 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 OR2L2Q8NH16 312 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 FAM120BQ96EK7 910 aaKnown RBP3.64□□□□□ -1.83
SMC4-223ENST00000493695 GIMAP5Q96F15 307 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 CCDC34Q96HJ3 373 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 TIGD1Q96MW7 591 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 SYNCQ9H7C4 482 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 KAT14Q9H8E8 782 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 MTMR10Q9NXD2 777 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 TMEM181Q9P2C4 612 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 LRWD1Q9UFC0 647 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 TBC1D29Q9UFV1 150 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 FBXO2Q9UK22 296 aaPredicted RBP3.64□□□□□ -1.83
SMC4-223ENST00000493695 MAU2Q9Y6X3 613 aa3.64□□□□□ -1.83
SMC4-223ENST00000493695 CROCCQ5TZA2 2017 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 A0A1W2PP11 408 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 C1orf226A1L170 272 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 PTGES3LE9PB15 166 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 SLCO1B7G3V0H7 640 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 ZNF197O14709 1029 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 DUS4LO95620 317 aaKnown RBP3.63□□□□□ -1.83
SMC4-223ENST00000493695 RAF1P04049 648 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 FAM157CP0CG43 387 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 PRG2P13727 222 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 TLX1P31314 330 aaPredicted RBP3.63□□□□□ -1.83
SMC4-223ENST00000493695 CEACAM8P31997 349 aaPredicted RBP3.63□□□□□ -1.83
SMC4-223ENST00000493695 CDH8P55286 799 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 SNX16P57768 344 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 TAS2R40P59535 323 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 TFAP4Q01664 338 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 CHST9Q7L1S5 443 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 SZRD1Q7Z422 152 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 DNAJC22Q8N4W6 341 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 SLC5A8Q8N695 610 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 HJURPQ8NCD3 748 aaPredicted RBP3.63□□□□□ -1.83
SMC4-223ENST00000493695 OR1J2Q8NGS2 313 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 SLX1AQ9BQ83 275 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 SIL1Q9H173 461 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 SH2D4AQ9H788 454 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 RRP7BPQ9NSQ0 103 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 PRR34Q9NV39 138 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 CWC15Q9P013 229 aaKnown RBP3.63□□□□□ -1.83
SMC4-223ENST00000493695 SWAP70Q9UH65 585 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 ASIC3Q9UHC3 531 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 VPS28Q9UK41 221 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 CSAG2Q9Y5P2 127 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 SESN1Q9Y6P5 492 aa3.63□□□□□ -1.83
SMC4-223ENST00000493695 IGHV4-4A0A075B6R2 117 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 A0A1W2PR77 199 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 HMGB1P1B2RPK0 211 aaPredicted RBP3.62□□□□□ -1.83
SMC4-223ENST00000493695 PI15O43692 258 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 PGM3O95394 542 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 EDN1P05305 212 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 CDC25CP30307 473 aa3.62□□□□□ -1.83
SMC4-223ENST00000493695 PPARGP37231 505 aaPredicted RBP3.62□□□□□ -1.83
SMC4-223ENST00000493695 CDH11P55287 796 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms