RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 RPE65Q16518 533 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 RSPO4Q2I0M5 234 aaPredicted RBP11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 KLHL38Q2WGJ6 581 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 INAVAQ3KP66 663 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 C14orf28Q4W4Y0 310 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 PLEKHS1Q5SXH7 462 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 FAM45BPQ6NSW5 357 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 GUSBP11Q6P575 273 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 TMEM207Q6UWW9 146 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 OTOAQ7RTW8 1153 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 PDZD3Q86UT5 571 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 CEP97Q8IW35 865 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 SLC22A15Q8IZD6 547 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 MREGQ8N565 214 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 FAM45AQ8TCE6 357 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 GLMNQ92990 594 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 TMEM159Q96B96 161 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 TXNDC16Q9P2K2 825 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 KLHL42Q9P2K6 505 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 FTSJ1Q9UET6 329 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 TSR3Q9UJK0 312 aaKnown RBP11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 SLC39A10Q9ULF5 831 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 PADI4Q9UM07 663 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 VWA7Q9Y334 891 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 CFAP20Q9Y6A4 193 aaKnown RBP11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 RNF215Q9Y6U7 377 aa11.84□□□□□ -0.51
RHBDF1-211ENST00000493647 KIR2DS5A0A0G2JLQ3 304 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 A0A0G2JNG1 304 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 EXOC1LA0A1B0GW35 172 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 KIR2DS3K7RE56 304 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 GIPC1O14908 333 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 CASC3O15234 703 aaKnown RBP11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 PPM1DO15297 605 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 TSPAN12O95859 305 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 ITGA2BP08514 1039 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 SLC35G4P0C7Q5 338 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 MTHFD1P11586 935 aaKnown RBP11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 CKMT1AP12532 417 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 XRCC1P18887 633 aaPredicted RBP11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 SAT1P21673 171 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 SPRP35270 261 aaPredicted RBP11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 GMPRP36959 345 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 KIR2DS5Q14953 304 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 NR0B2Q15466 257 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 PERM1Q5SV97 790 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 PAQR3Q6TCH7 311 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 CYHR1Q6ZMK1 362 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 CPNE9Q8IYJ1 553 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 PHC3Q8NDX5 983 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 OR2W6PQ8NHA6 318 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 MAPK15Q8TD08 544 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 ASZ1Q8WWH4 475 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 INPP5DQ92835 1189 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 C12orf66Q96MD2 445 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 NRTNQ99748 197 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 IMP3Q9NV31 184 aaKnown RBP11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 TAS2R13Q9NYV9 303 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 TRMT6Q9UJA5 497 aaKnown RBP11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 CDV3Q9UKY7 258 aaKnown RBP11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 RUVBL2Q9Y230 463 aaKnown RBP11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 PIKFYVEQ9Y2I7 2098 aa11.83□□□□□ -0.52
RHBDF1-211ENST00000493647 ARHGEF17Q96PE2 2063 aaPredicted RBP11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 CPED1A4D0V7 1026 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 OR5K4A6NMS3 321 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 KPNA5O15131 536 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 PHGDHO43175 533 aaKnown RBP11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 INHBAP08476 426 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 SLC2A4P14672 509 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 CKMT2P17540 419 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 CSRP1P21291 193 aaKnown RBP11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 ATP5DP30049 168 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 HALP42357 657 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 MSH2P43246 934 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 ACADVLP49748 655 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 CSRP3P50461 194 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 POU4F1Q01851 419 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 PLOD1Q02809 727 aaPredicted RBP11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 ABRQ12979 859 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 USP10Q14694 798 aaKnown RBP11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 ZKSCAN8Q15776 578 aaPredicted RBP11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 MROH9Q5TGP6 573 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 EFL1Q7Z2Z2 1120 aaKnown RBP11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 PIWIL4Q7Z3Z4 852 aaKnown RBP11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 ZNF438Q7Z4V0 828 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 CMC1Q7Z7K0 106 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 ZNF761Q86XN6 746 aaPredicted RBP11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 RASGRP3Q8IV61 690 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 EEF1AKMT1Q8WVE0 214 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 JPH3Q8WXH2 748 aaPredicted RBP11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 CCDC74AQ96AQ1 378 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 TOR4AQ9NXH8 423 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 CPNE7Q9UBL6 633 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 ZNF180Q9UJW8 692 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 IKZF3Q9UKT9 509 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 NFS1Q9Y697 457 aa11.82□□□□□ -0.52
RHBDF1-211ENST00000493647 COL5A1P20908 1838 aaPredicted RBP11.81□□□□□ -0.52
RHBDF1-211ENST00000493647 SPAARA0A1B0GVQ0 90 aa11.81□□□□□ -0.52
RHBDF1-211ENST00000493647 EME2A4GXA9 379 aaPredicted RBP11.81□□□□□ -0.52
RHBDF1-211ENST00000493647 CCDC151A5D8V7 595 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms