RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 LZTS3O60299 673 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 NIPSNAP2O75323 286 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 RECQL5O94762 991 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 RASAL1O95294 804 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 SNAPINO95295 136 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 C1QBP02746 253 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 FDX1P10109 184 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 NR2C1P13056 603 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 SOX6P35712 828 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 GGT5P36269 586 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 SMSP52788 366 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 RAB25P57735 213 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 TGFB2P61812 414 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 RPL6Q02878 288 aaKnown RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 CREMQ03060 361 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 TCP10Q12799 353 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 SPDYE2Q495Y8 402 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 EPC2Q52LR7 807 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 ANGEL2Q5VTE6 544 aaKnown RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 RRM2BQ7LG56 351 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 RNF180Q86T96 592 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 RBM23Q86U06 439 aaKnown RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 RASGRP3Q8IV61 690 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 RNASE11Q8TAA1 199 aaKnown RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 C2CD4CQ8TF44 421 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 SLCO4A1Q96BD0 722 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 LXNQ9BS40 222 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 SLIRPQ9GZT3 109 aaKnown RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 SLC22A4Q9H015 551 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 FAM49AQ9H0Q0 323 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 NDUFAF4Q9P032 175 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 OPTCQ9UBM4 332 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF222Q9UK12 451 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 DNMT3AQ9Y6K1 912 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-205ENST00000493587 TSC2P49815 1807 aa6.76□□□□□ -1.33
VPS13B-205ENST00000493587 PRORSD1PA6NEY8 169 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 ARGFXA6NJG6 315 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 TRAPPC2P0DI81 140 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 TRAPPC2BP0DI82 140 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 FCGR1AP12314 374 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 CBR1P16152 277 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 AGXTP21549 392 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 PDHA2P29803 388 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 ACSL1P33121 698 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF81P51508 661 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 EIF6P56537 245 aaKnown RBP6.75□□□□□ -1.33
VPS13B-205ENST00000493587 CDH17Q12864 832 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 NFX1Q12986 1120 aaKnown RBP6.75□□□□□ -1.33
VPS13B-205ENST00000493587 SEC23BQ15437 767 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 C6orf141Q5SZD1 244 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 LIN9Q5TKA1 542 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 TTC23Q5W5X9 447 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 MBLAC2Q68D91 279 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 KRT25Q7Z3Z0 450 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 ADGRG3Q86Y34 549 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 CEP76Q8TAP6 659 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 TBCKQ8TEA7 893 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 MYLPFQ96A32 169 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 RAD51AP1Q96B01 352 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 CELF6Q96J87 481 aaKnown RBP6.75□□□□□ -1.33
VPS13B-205ENST00000493587 HYLS1Q96M11 299 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 ZSWIM3Q96MP5 696 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 RPRD1AQ96P16 312 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-205ENST00000493587 CRB3Q9BUF7 120 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 CEP41Q9BYV8 373 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 ZYG11BQ9C0D3 744 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 PCDH9Q9HC56 1237 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 ANKHQ9HCJ1 492 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 SLC22A11Q9NSA0 550 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 FAM49BQ9NUQ9 324 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 TMEM260Q9NX78 707 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 SCN3BQ9NY72 215 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 BPTFQ12830 3046 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 PATJQ8NI35 1801 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 TEX13CA0A0J9YWL9 993 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 SLC12A8A0AV02 714 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 GLRA3O75311 464 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 RFPL3O75679 317 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 IL33O95760 270 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 JUNP05412 331 aaKnown RBP6.75□□□□□ -1.33
VPS13B-205ENST00000493587 URODP06132 367 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 NFICP08651 508 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 THRBP10828 461 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 FOSL2P15408 326 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 S100PP25815 95 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 PBLDP30039 288 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-205ENST00000493587 GABRB2P47870 512 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF91Q05481 1191 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 CXCL9Q07325 125 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 FGL1Q08830 312 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 TRAM2Q15035 370 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 TEX261Q6UWH6 196 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF852Q6ZMS4 543 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 ZNF782Q6ZMW2 699 aaPredicted RBP6.75□□□□□ -1.33
VPS13B-205ENST00000493587 ILDR2Q71H61 639 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 GPAT4Q86UL3 456 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 SULF1Q8IWU6 871 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 CMTR2Q8IYT2 770 aaKnown RBP6.75□□□□□ -1.33
VPS13B-205ENST00000493587 AKR7LQ8NHP1 331 aa6.75□□□□□ -1.33
VPS13B-205ENST00000493587 MAPK15Q8TD08 544 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms