RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 NSMCE3Q96MG7 304 aa9.88□□□□□ -0.83
PRPF3-206ENST00000493553 MIPEPQ99797 713 aa9.88□□□□□ -0.83
PRPF3-206ENST00000493553 SLC25A23Q9BV35 468 aa9.88□□□□□ -0.83
PRPF3-206ENST00000493553 MRPL1Q9BYD6 325 aaKnown RBP9.88□□□□□ -0.83
PRPF3-206ENST00000493553 GSTO2Q9H4Y5 243 aa9.88□□□□□ -0.83
PRPF3-206ENST00000493553 BRD9Q9H8M2 597 aa9.88□□□□□ -0.83
PRPF3-206ENST00000493553 TRPV4Q9HBA0 871 aa9.88□□□□□ -0.83
PRPF3-206ENST00000493553 RDH14Q9HBH5 336 aa9.88□□□□□ -0.83
PRPF3-206ENST00000493553 SMOXQ9NWM0 555 aa9.88□□□□□ -0.83
PRPF3-206ENST00000493553 DUS2Q9NX74 493 aaKnown RBP9.88□□□□□ -0.83
PRPF3-206ENST00000493553 CD274Q9NZQ7 290 aa9.88□□□□□ -0.83
PRPF3-206ENST00000493553 PLA2G4CQ9UP65 541 aa9.88□□□□□ -0.83
PRPF3-206ENST00000493553 HTTP42858 3142 aa9.88□□□□□ -0.83
PRPF3-206ENST00000493553 SDHDO14521 159 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 SLC16A5O15375 505 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 ECI2O75521 394 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 ZNF821O75541 412 aaPredicted RBP9.87□□□□□ -0.83
PRPF3-206ENST00000493553 RFPL2O75678 378 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 ESRRBO95718 433 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 RPS17P08708 135 aaKnown RBP9.87□□□□□ -0.83
PRPF3-206ENST00000493553 UROSP10746 265 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 IDO1P14902 403 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 EPCAMP16422 314 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 BPIP17213 487 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 CTPS1P17812 591 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 VCLP18206 1134 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 EPHA3P29320 983 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 MRPL19P49406 292 aaKnown RBP9.87□□□□□ -0.83
PRPF3-206ENST00000493553 CLCN7P51798 805 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 CCNG1P51959 295 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 AP2B1P63010 937 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 CLCQ05315 142 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 ART3Q13508 389 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 PTPRCAPQ14761 206 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 DHCR24Q15392 516 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 RAB30Q15771 203 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 PDCD2Q16342 344 aaPredicted RBP9.87□□□□□ -0.83
PRPF3-206ENST00000493553 GSTA3Q16772 222 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 SMU1Q2TAY7 513 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 ZNF805Q5CZA5 627 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 CTSL3PQ5NE16 218 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 SULT1C3Q6IMI6 304 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 PRMT9Q6P2P2 845 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 CRTC1Q6UUV9 634 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 FAM151BQ6UXP7 276 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 DPY19L3Q6ZPD9 716 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 GRASPQ7Z6J2 395 aaPredicted RBP9.87□□□□□ -0.83
PRPF3-206ENST00000493553 DSG4Q86SJ6 1040 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 ADIPOR2Q86V24 386 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 SULF2Q8IWU5 870 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 ULK2Q8IYT8 1036 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 FAM9CQ8IZT9 166 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 ZBTB2Q8N680 514 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 PCYOX1LQ8NBM8 494 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 PPFIBP2Q8ND30 876 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 RIN3Q8TB24 985 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 GATA6Q92908 595 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 SMARCD2Q92925 531 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 ZNF707Q96C28 371 aaPredicted RBP9.87□□□□□ -0.83
PRPF3-206ENST00000493553 TCEAL4Q96EI5 215 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 C19orf60Q96EN9 201 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 OR52B2Q96RD2 323 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 ZNF382Q96SR6 550 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 C17orf80Q9BSJ5 609 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 ZSCAN5AQ9BUG6 496 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 TNKS2Q9H2K2 1166 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 VCX3BQ9H321 246 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 DENND2DQ9H6A0 471 aaPredicted RBP9.87□□□□□ -0.83
PRPF3-206ENST00000493553 ZNF385DQ9H6B1 395 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 ZDHHC6Q9H6R6 413 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 ZBTB26Q9HCK0 441 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 BPIFA1Q9NP55 256 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 HCFC1R1Q9NWW0 138 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 CRIM1Q9NZV1 1036 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 CCL26Q9Y258 94 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 MED16Q9Y2X0 877 aa9.87□□□□□ -0.83
PRPF3-206ENST00000493553 IGLV3-16A0A075B6K0 115 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 NEMP2A6NFY4 417 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 UPK3BL1B0FP48 263 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 UPK3BL2E5RIL1 263 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 UBXN8O00124 270 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 PSMD12O00232 456 aaPredicted RBP9.86□□□□□ -0.83
PRPF3-206ENST00000493553 SCAMP3O14828 347 aaKnown RBP9.86□□□□□ -0.83
PRPF3-206ENST00000493553 TMPRSS2O15393 492 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 NIPSNAP2O75323 286 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 CLDN7O95471 211 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 PRAMEF12O95522 483 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 TSPAN12O95859 305 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 OTCP00480 354 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 FTH1P02794 183 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 UGT2B4P06133 528 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 C8GP07360 202 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 F7P08709 466 aaPredicted RBP9.86□□□□□ -0.83
PRPF3-206ENST00000493553 ALPIP09923 528 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 MTHFD2P13995 350 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 HNRNPLP14866 589 aaKnown RBP eCLIP9.86□□□□□ -0.83
PRPF3-206ENST00000493553 EN2P19622 333 aaPredicted RBP9.86□□□□□ -0.83
PRPF3-206ENST00000493553 MSH3P20585 1137 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 NME2P22392 152 aa9.86□□□□□ -0.83
PRPF3-206ENST00000493553 EEF1DP29692 281 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms