RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 EGFL8Q99944 293 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 BRINP2Q9C0B6 783 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 ARMC7Q9H6L4 198 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 MBD1Q9UIS9 605 aaPredicted RBP12.64□□□□□ -0.39
PRAME-213ENST00000492657 ST14Q9Y5Y6 855 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 NUP214P35658 2090 aaPredicted RBP12.64□□□□□ -0.39
PRAME-213ENST00000492657 INPP4BO15327 924 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 LATS1O95835 1130 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 CDH2P19022 906 aaPredicted RBP12.64□□□□□ -0.39
PRAME-213ENST00000492657 ITGALP20701 1170 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 ACRV1P26436 265 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 TRAF3Q13114 568 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 DCTN2Q13561 401 aaKnown RBP12.64□□□□□ -0.39
PRAME-213ENST00000492657 PCBP2Q15366 365 aaKnown RBP eCLIP12.64□□□□□ -0.39
PRAME-213ENST00000492657 NR6A1Q15406 480 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 NANOGP8Q6NSW7 305 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 MILR1Q7Z6M3 343 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 ADAMTSL2Q86TH1 951 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 DDX53Q86TM3 631 aaKnown RBP12.64□□□□□ -0.39
PRAME-213ENST00000492657 CHERPQ8IWX8 916 aaKnown RBP12.64□□□□□ -0.39
PRAME-213ENST00000492657 RBFAQ8N0V3 343 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 FIBCD1Q8N539 461 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 MIPOL1Q8TD10 442 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 MRPS31Q92665 395 aaKnown RBP12.64□□□□□ -0.39
PRAME-213ENST00000492657 EFHD1Q9BUP0 239 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 NANOGQ9H9S0 305 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 TMEM39AQ9NV64 488 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 RIC8BQ9NVN3 520 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 LSM7Q9UK45 103 aaKnown RBP12.64□□□□□ -0.39
PRAME-213ENST00000492657 FAF1Q9UNN5 650 aaPredicted RBP12.64□□□□□ -0.39
PRAME-213ENST00000492657 DMTF1Q9Y222 760 aa12.64□□□□□ -0.39
PRAME-213ENST00000492657 EEDO75530 441 aaKnown RBP12.63□□□□□ -0.39
PRAME-213ENST00000492657 S100BP04271 92 aaPredicted RBP12.63□□□□□ -0.39
PRAME-213ENST00000492657 ACRP10323 421 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 NAA20P61599 178 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 APOFQ13790 326 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 AP5B1Q2VPB7 878 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 TMEM259Q4ZIN3 620 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 PDCD4Q53EL6 469 aaKnown RBP12.63□□□□□ -0.39
PRAME-213ENST00000492657 CRTC1Q6UUV9 634 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 ERMP1Q7Z2K6 904 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 EFL1Q7Z2Z2 1120 aaKnown RBP12.63□□□□□ -0.39
PRAME-213ENST00000492657 FAM217AQ8IXS0 508 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 ADGRG5Q8IZF4 528 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 PPM1MQ96MI6 270 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 ALG2Q9H553 416 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 RC3H2Q9HBD1 1191 aaKnown RBP12.63□□□□□ -0.39
PRAME-213ENST00000492657 ABCB8Q9NUT2 735 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 ARMC1Q9NVT9 282 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 ACTR3BQ9P1U1 418 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 PTBP2Q9UKA9 531 aaKnown RBP12.63□□□□□ -0.39
PRAME-213ENST00000492657 CNOT11Q9UKZ1 510 aaKnown RBP12.63□□□□□ -0.39
PRAME-213ENST00000492657 TBX21Q9UL17 535 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 CCL26Q9Y258 94 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 POLR3HQ9Y535 204 aaPredicted RBP12.63□□□□□ -0.39
PRAME-213ENST00000492657 RAD51BO15315 384 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 GGT5P36269 586 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 HMGCS1Q01581 520 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 SELPLGQ14242 412 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 SLC44A4Q53GD3 710 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 GPRC6AQ5T6X5 926 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 ASTLQ6HA08 431 aaPredicted RBP12.63□□□□□ -0.39
PRAME-213ENST00000492657 CMTR2Q8IYT2 770 aaKnown RBP12.63□□□□□ -0.39
PRAME-213ENST00000492657 CBR4Q8N4T8 237 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 SLC22A17Q8WUG5 538 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 KCTD14Q9BQ13 255 aaPredicted RBP12.63□□□□□ -0.39
PRAME-213ENST00000492657 SLC46A2Q9BY10 475 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 LRRC3Q9BY71 257 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 INIPQ9NRY2 104 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 DUS2Q9NX74 493 aaKnown RBP12.63□□□□□ -0.39
PRAME-213ENST00000492657 SUN2Q9UH99 717 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 GNPTGQ9UJJ9 305 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 CEPT1Q9Y6K0 416 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 SCN8AQ9UQD0 1980 aa12.63□□□□□ -0.39
PRAME-213ENST00000492657 DENND4CQ5VZ89 1909 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 FAM234BA2RU67 622 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 KRT87PA6NCN2 255 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 LSM1O15116 133 aaKnown RBP12.62□□□□□ -0.39
PRAME-213ENST00000492657 SLC2A4P14672 509 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 CSF2RAP15509 400 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 RPS3P23396 243 aaKnown RBP eCLIP12.62□□□□□ -0.395e-17■■□□□ 14.2
PRAME-213ENST00000492657 OR4D2P58180 307 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 CD300CQ08708 224 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 CYP51A1Q16850 503 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 LCN8Q6JVE9 175 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 CYP20A1Q6UW02 462 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 HTR3DQ70Z44 454 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 ITIH5Q86UX2 942 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 TMC8Q8IU68 726 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 EPHX4Q8IUS5 362 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 ZBTB2Q8N680 514 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 OSBPL11Q9BXB4 747 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 FAM126AQ9BYI3 521 aaPredicted RBP12.62□□□□□ -0.39
PRAME-213ENST00000492657 ATP13A3Q9H7F0 1226 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 PFDN4Q9NQP4 134 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 HECAQ9UBI9 543 aaPredicted RBP12.62□□□□□ -0.39
PRAME-213ENST00000492657 EBF1Q9UH73 591 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 ZNHIT2Q9UHR6 403 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 SLCO3A1Q9UIG8 710 aa12.62□□□□□ -0.39
PRAME-213ENST00000492657 LEF1Q9UJU2 399 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms