RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 C20orf27Q9GZN8 174 aa9.28□□□□□ -0.92
BRCA1-219ENST00000491747 SLC32A1Q9H598 525 aa9.28□□□□□ -0.92
BRCA1-219ENST00000491747 ZNF395Q9H8N7 513 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-219ENST00000491747 SMYD2Q9NRG4 433 aa9.28□□□□□ -0.92
BRCA1-219ENST00000491747 TOR4AQ9NXH8 423 aa9.28□□□□□ -0.92
BRCA1-219ENST00000491747 COMMD3-BMI1R4GMX3 469 aa9.28□□□□□ -0.92
BRCA1-219ENST00000491747 CACNA1AO00555 2505 aa9.28□□□□□ -0.92
BRCA1-219ENST00000491747 CCNT2O60583 730 aaKnown RBP9.27□□□□□ -0.93
BRCA1-219ENST00000491747 USP1O94782 785 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 NDST3O95803 873 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 NME1P15531 152 aaKnown RBP9.27□□□□□ -0.93
BRCA1-219ENST00000491747 ZNF30P17039 623 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 NFKBIAP25963 317 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 LAMB3Q13751 1172 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 NFATC4Q14934 902 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 ALG11Q2TAA5 492 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 FASTKD1Q53R41 847 aaKnown RBP9.27□□□□□ -0.93
BRCA1-219ENST00000491747 FAXCQ5TGI0 409 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 ENPP7Q6UWV6 458 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 ZCCHC23Q6ZST2 131 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 RAPH1Q70E73 1250 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 IPMKQ8NFU5 416 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 ACMSDQ8TDX5 336 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 SLC26A7Q8TE54 656 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 PPP4R1Q8TF05 950 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 PTCD2Q8WV60 388 aaKnown RBP9.27□□□□□ -0.93
BRCA1-219ENST00000491747 NCSTNQ92542 709 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 SPATA13Q96N96 652 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 EBNA1BP2Q99848 306 aaKnown RBP9.27□□□□□ -0.93
BRCA1-219ENST00000491747 KLHL4Q9C0H6 718 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 MRPL40Q9NQ50 206 aaKnown RBP9.27□□□□□ -0.93
BRCA1-219ENST00000491747 PTPRBP23467 1997 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 TRIM38O00635 465 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 TOR1BO14657 336 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 YKT6O15498 198 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 UGT1A9O60656 530 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 GLRA3O75311 464 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 GCATO75600 419 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 METTL18O95568 372 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 TOP3BO95985 862 aaKnown RBP9.27□□□□□ -0.93
BRCA1-219ENST00000491747 FUCA1P04066 466 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 CELA2BP08218 269 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-219ENST00000491747 UQCRBP14927 111 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 JUNDP17535 347 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 ADRA1AP35348 466 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 GRK6P43250 576 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 MAGEA3P43357 314 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 SIM1P81133 766 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-219ENST00000491747 SLC25A3Q00325 362 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 DPTQ07507 201 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 MPP3Q13368 585 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 C1orf61Q13536 156 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 PTK2BQ14289 1009 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 CYS1Q717R9 158 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 SDCCAG8Q86SQ7 713 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-219ENST00000491747 SLCO6A1Q86UG4 719 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 PHACTR4Q8IZ21 702 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 PYDC1Q8WXC3 89 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 CMTM5Q96DZ9 223 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 RIOK2Q9BVS4 552 aaKnown RBP9.27□□□□□ -0.93
BRCA1-219ENST00000491747 TEX101Q9BY14 249 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 CLPBQ9H078 707 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 UGT1A7Q9HAW7 530 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 UGT1A10Q9HAW8 530 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 UGT1A8Q9HAW9 530 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 PLAC1Q9HBJ0 212 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 MAGEE1Q9HCI5 957 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 DNAJC16Q9Y2G8 782 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 ZNF711Q9Y462 761 aa9.27□□□□□ -0.93
BRCA1-219ENST00000491747 ZNF106Q9H2Y7 1883 aaKnown RBP9.27□□□□□ -0.93
BRCA1-219ENST00000491747 CNOT1A5YKK6 2376 aaKnown RBP9.26□□□□□ -0.93
BRCA1-219ENST00000491747 PLXNB3Q9ULL4 1909 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 HMX2A2RU54 273 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 FFAR2O15552 330 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 PABPC4LP0CB38 370 aaKnown RBP9.26□□□□□ -0.93
BRCA1-219ENST00000491747 MYF5P13349 255 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 TPSB2P20231 275 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 GRK2P25098 689 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 SLC1A6P48664 564 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 SPINT3P49223 89 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 KIAA1024LP59773 190 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 PDE1BQ01064 536 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 TCEA2Q15560 299 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 TPSAB1Q15661 275 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 TRMT10BQ6PF06 316 aaKnown RBP9.26□□□□□ -0.93
BRCA1-219ENST00000491747 GLRX5Q86SX6 157 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 HEATR4Q86WZ0 1026 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 KLHDC8BQ8IXV7 354 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 PNPLA1Q8N8W4 532 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 GPR26Q8NDV2 337 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 ZNF548Q8NEK5 533 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-219ENST00000491747 ACTRT2Q8TDY3 377 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 OR1E3Q8WZA6 343 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 CDKL2Q92772 493 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 AP2M1Q96CW1 435 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 PDXPQ96GD0 296 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 SIGLEC10Q96LC7 697 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 APOL2Q9BQE5 337 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 FICDQ9BVA6 458 aa9.26□□□□□ -0.93
BRCA1-219ENST00000491747 ZFYVE1Q9HBF4 777 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms