RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 ANO6Q4KMQ2 910 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 SIRPB2Q5JXA9 342 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 FNBP1LQ5T0N5 605 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 TMTC4Q5T4D3 741 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 SASS6Q6UVJ0 657 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 CLEC17AQ6ZS10 378 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 Q6ZS92 163 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 DAAM2Q86T65 1068 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 CARFQ8N187 725 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 GALNT16Q8N428 558 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 OR4E2Q8NGC2 313 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 ZFPM2Q8WW38 1151 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 SGSM3Q96HU1 749 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 TTC25Q96NG3 672 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 UNKQ9C0B0 810 aaKnown RBP12.84□□□□□ -0.35
USF1-206ENST00000491629 XPO4Q9C0E2 1151 aaKnown RBP12.84□□□□□ -0.35
USF1-206ENST00000491629 FAM8A1Q9UBU6 413 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 MTORP42345 2549 aa12.84□□□□□ -0.35
USF1-206ENST00000491629 BTN3A3O00478 584 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 ZNF749O43361 778 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 CTSBP07858 339 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 MSL3P1P0C860 447 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 CBSLP0DN79 551 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 PVRP15151 417 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 CDH3P22223 829 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 PTPN3P26045 913 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 PRDX3P30048 256 aaKnown RBP12.83□□□□□ -0.36
USF1-206ENST00000491629 CBSP35520 551 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 SPAM1P38567 509 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 MYBPC3Q14896 1274 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 LLGL1Q15334 1064 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 KYNUQ16719 465 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 TEX44Q53QW1 395 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 DCAF10Q5QP82 559 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 LDLRAP1Q5SW96 308 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 MICALCLQ6ZW33 695 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 DET1Q7L5Y6 550 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 MAP7D3Q8IWC1 876 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 MARVELD3Q96A59 401 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 MRGPRX2Q96LB1 330 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 TRAPPC9Q96Q05 1148 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 PACSIN1Q9BY11 444 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 PITPNM3Q9BZ71 974 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 KLHL25Q9H0H3 589 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 C1GALT1Q9NS00 363 aa12.83□□□□□ -0.36
USF1-206ENST00000491629 COPG1Q9Y678 874 aaKnown RBP12.83□□□□□ -0.36
USF1-206ENST00000491629 GLYATL1P3A0A0U1RQE8 302 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 ARHGAP10A1A4S6 786 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 MGAT4DA6NG13 374 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 BTN3A1O00481 513 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 HLA-DPA1P20036 260 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 GRNP28799 593 aaKnown RBP12.82□□□□□ -0.36
USF1-206ENST00000491629 PREPP48147 710 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 GABRA4P48169 554 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 WNT3AP56704 352 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 WASHC5Q12768 1159 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 NR1I3Q14994 352 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 FIGNQ5HY92 759 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 ARMC6Q6NXE6 501 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 ALKBH5Q6P6C2 394 aaKnown RBP12.82□□□□□ -0.36
USF1-206ENST00000491629 CDHR3Q6ZTQ4 885 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 KCNMB4Q86W47 210 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 RAB43Q86YS6 212 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 SLC34A3Q8N130 599 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 SLC25A41Q8N5S1 370 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 ST6GALNAC3Q8NDV1 305 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 OR2L2Q8NH16 312 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 TEKT5Q96M29 485 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 PHF12Q96QT6 1004 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 ILKAPQ9H0C8 392 aaPredicted RBP12.82□□□□□ -0.36
USF1-206ENST00000491629 FAM60AQ9NP50 221 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 ACSL5Q9ULC5 683 aa12.82□□□□□ -0.36
USF1-206ENST00000491629 G3BP2Q9UN86 482 aaKnown RBP12.82□□□□□ -0.36
USF1-206ENST00000491629 A0A0A6YYK5 440 aaPredicted RBP12.81□□□□□ -0.36
USF1-206ENST00000491629 LRRD1A4D1F6 860 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 LRRTM2O43300 516 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 LDB2O43679 373 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 KRT38O76015 456 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 POLBP06746 335 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 UMODP07911 640 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 CYP2A7P20853 494 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 PBX1P40424 430 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 GLRBP48167 497 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 SOX8P57073 446 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 TYRO3Q06418 890 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 SSPNQ14714 243 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 ZIC1Q15915 447 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 PPP2R5EQ16537 467 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 ZNF658BQ4V348 819 aaPredicted RBP12.81□□□□□ -0.36
USF1-206ENST00000491629 PPP1R32Q7Z5V6 425 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 OXNAD1Q96HP4 312 aaPredicted RBP12.81□□□□□ -0.36
USF1-206ENST00000491629 ZNF830Q96NB3 372 aaPredicted RBP12.81□□□□□ -0.36
USF1-206ENST00000491629 ZCCHC2Q9C0B9 1178 aaKnown RBP12.81□□□□□ -0.36
USF1-206ENST00000491629 TRABDQ9H4I3 376 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 FANCEQ9HB96 536 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 SMOXQ9NWM0 555 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 P4HTMQ9NXG6 502 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 SAE1Q9UBE0 346 aaPredicted RBP12.81□□□□□ -0.36
USF1-206ENST00000491629 ENTPD4Q9Y227 616 aa12.81□□□□□ -0.36
USF1-206ENST00000491629 CACNA1CQ13936 2221 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms