RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 MAGEB17A8MXT2 336 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 PLOD2O00469 737 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 PCDH7O60245 1069 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 H1F0P07305 194 aaKnown RBP4.74□□□□□ -1.65
CCDC39-206ENST00000489868 LIFP15018 202 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 GNB3P16520 340 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 ALOX12P18054 663 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 PLA2G7Q13093 441 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 KRT33BQ14525 404 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 CEP85LQ5SZL2 805 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 MZT2BQ6NZ67 158 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 TEX38Q6PEX7 206 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 MFSD6Q6ZSS7 791 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 ADIPOR2Q86V24 386 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 RPAP2Q8IXW5 612 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-206ENST00000489868 OR2AJ1Q8NGZ0 328 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 CTCFLQ8NI51 663 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-206ENST00000489868 CCDC34Q96HJ3 373 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 OR6C1Q96RD1 312 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 RHNO1Q9BSD3 238 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 RBM4Q9BWF3 364 aaKnown RBP4.74□□□□□ -1.65
CCDC39-206ENST00000489868 SPATC1LQ9H0A9 340 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 KCNK15Q9H427 330 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 CHMP1AQ9HD42 196 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-206ENST00000489868 ACKR4Q9NPB9 350 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 SIX2Q9NPC8 291 aa4.74□□□□□ -1.65
CCDC39-206ENST00000489868 LOC102723996A0A087X1L8 192 aa4.73□□□□□ -1.65
CCDC39-206ENST00000489868 ELOVL7A1L3X0 281 aa4.73□□□□□ -1.65
CCDC39-206ENST00000489868 SSX4O60224 188 aa4.73□□□□□ -1.65
CCDC39-206ENST00000489868 PGM3O95394 542 aa4.73□□□□□ -1.65
CCDC39-206ENST00000489868 NADKO95544 446 aaPredicted RBP4.73□□□□□ -1.65
CCDC39-206ENST00000489868 FRMD6-AS1P0C7T7 363 aa4.73□□□□□ -1.65
CCDC39-206ENST00000489868 CHAF1BQ13112 559 aa4.73□□□□□ -1.65
CCDC39-206ENST00000489868 WTAPQ15007 396 aa4.73□□□□□ -1.65
CCDC39-206ENST00000489868 C14orf177Q52M58 125 aa4.73□□□□□ -1.65
CCDC39-206ENST00000489868 FIGLAQ6QHK4 219 aa4.73□□□□□ -1.65
CCDC39-206ENST00000489868 FASTKD5Q7L8L6 764 aaKnown RBP4.73□□□□□ -1.65
CCDC39-206ENST00000489868 CEP57Q86XR8 500 aa4.73□□□□□ -1.65
CCDC39-206ENST00000489868 CPSF7Q8N684 471 aaKnown RBP4.73□□□□□ -1.65
CCDC39-206ENST00000489868 TMEM190Q8WZ59 177 aa4.73□□□□□ -1.65
CCDC39-206ENST00000489868 SLC22A18Q96BI1 424 aa4.73□□□□□ -1.65
CCDC39-206ENST00000489868 CDRT15Q96T59 188 aa4.73□□□□□ -1.65
CCDC39-206ENST00000489868 OLFML3Q9NRN5 406 aa4.73□□□□□ -1.65
CCDC39-206ENST00000489868 C2CD2Q9Y426 696 aa4.73□□□□□ -1.65
CCDC39-206ENST00000489868 FEZF1A0PJY2 475 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 A6NL46 340 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 CSPG5O95196 566 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 ALDH4A1P30038 563 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 CHRNB4P30926 498 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 GABRA5P31644 462 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 ACTN2P35609 894 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 NAP1L1P55209 391 aaKnown RBP4.72□□□□□ -1.65
CCDC39-206ENST00000489868 CDH11P55287 796 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 SNX16P57768 344 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 EPS8Q12929 822 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 PPIGQ13427 754 aaKnown RBP eCLIP4.72□□□□□ -1.65
CCDC39-206ENST00000489868 CUL4AQ13619 759 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 IGSF11Q5DX21 431 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 KRT79Q5XKE5 535 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 CORO6Q6QEF8 472 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 FAM114A1Q8IWE2 563 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 CEP57L1Q8IYX8 460 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 SCML4Q8N228 414 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 PTPMT1Q8WUK0 201 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-206ENST00000489868 OLFM1Q99784 485 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 KIFC3Q9BVG8 833 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 DPAGT1Q9H3H5 408 aa4.72□□□□□ -1.65
CCDC39-206ENST00000489868 WBP11Q9Y2W2 641 aaKnown RBP4.72□□□□□ -1.65
CCDC39-206ENST00000489868 ZNF644Q9H582 1327 aaPredicted RBP4.72□□□□□ -1.65
CCDC39-206ENST00000489868 CYSRT1A8MQ03 144 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 XRCC3O43542 346 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 AHCYL1O43865 530 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 OR10H2O60403 315 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 AVILO75366 819 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 NGFP01138 241 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 MAP2K2P36507 400 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 B3GALT5-AS1P59052 145 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 SIRPAP78324 504 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 LMOD3Q0VAK6 560 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 GRAPQ13588 217 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 KRTAP27-1Q3LI81 207 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 KIAA1644Q3SXP7 199 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 RILPL1Q5EBL4 403 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 LCE1FQ5T754 118 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 SPATA1Q5VX52 437 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 TMCO3Q6UWJ1 677 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 ISCA2Q86U28 154 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 FBXO39Q8N4B4 442 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 GRHL3Q8TE85 626 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 CALML4Q96GE6 196 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 VN1R1Q9GZP7 353 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 ARRDC1-AS1Q9H2J1 176 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 PDE7BQ9NP56 450 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 COQ3Q9NZJ6 369 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.71□□□□□ -1.66
CCDC39-206ENST00000489868 ZNF541Q9H0D2 1346 aa4.71□□□□□ -1.66
CCDC39-206ENST00000489868 A0A087X002 238 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 HHLA1C9JL84 531 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 E9PI62 339 aa4.7□□□□□ -1.66
CCDC39-206ENST00000489868 DNM1LO00429 736 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms