RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 RSL24D1Q9UHA3 163 aaKnown RBP15.44■□□□□ 0.06
BRD9-208ENST00000489816 ZNF490Q9ULM2 529 aaPredicted RBP15.44■□□□□ 0.06
BRD9-208ENST00000489816 GAPDHSO14556 408 aaPredicted RBP15.43■□□□□ 0.06
BRD9-208ENST00000489816 RPS9P46781 194 aaKnown RBP15.43■□□□□ 0.06
BRD9-208ENST00000489816 TRAF3Q13114 568 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 SF1Q15637 639 aaKnown RBP15.43■□□□□ 0.06
BRD9-208ENST00000489816 ZFAND4Q86XD8 727 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 CMTM8Q8IZV2 173 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 C10orf111Q8N326 155 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 LIX1Q8N485 282 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 DHRSXQ8N5I4 330 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 ST13P5Q8NFI4 369 aaPredicted RBP15.43■□□□□ 0.06
BRD9-208ENST00000489816 NCLNQ969V3 563 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 ITCHQ96J02 903 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 TSSK3Q96PN8 268 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 CGREF1Q99674 301 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 TCRBV5S2A0A599 114 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 FAM234BA2RU67 622 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 RAD51BO15315 384 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 PGLSO95336 258 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 VARSP26640 1264 aaKnown RBP15.43■□□□□ 0.06
BRD9-208ENST00000489816 CALRP27797 417 aaKnown RBP15.43■□□□□ 0.06
BRD9-208ENST00000489816 GABRR2P28476 465 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 BFSP2Q13515 415 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 VEPH1Q14D04 833 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 DGKKQ5KSL6 1271 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 ITIH5Q86UX2 942 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 HID1Q8IV36 788 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 HS6ST3Q8IZP7 471 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 ITFG1Q8TB96 612 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 PLD4Q96BZ4 506 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 MUS81Q96NY9 551 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 DEFB118Q96PH6 123 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 C9orf16Q9BUW7 83 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 ADNPQ9H2P0 1102 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 HIPK3Q9H422 1215 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 OPTCQ9UBM4 332 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 VPS9D1Q9Y2B5 631 aa15.43■□□□□ 0.06
BRD9-208ENST00000489816 NPIPB15A6NHN6 443 aaPredicted RBP15.42■□□□□ 0.06
BRD9-208ENST00000489816 GSTA4O15217 222 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 KLK8O60259 260 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 VPS4BO75351 444 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 PARNO95453 639 aaKnown RBP15.42■□□□□ 0.06
BRD9-208ENST00000489816 CLCN2P51788 898 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 IL1RL1Q01638 556 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 BOP1Q14137 746 aaKnown RBP15.42■□□□□ 0.06
BRD9-208ENST00000489816 AARS2Q5JTZ9 985 aaKnown RBP15.42■□□□□ 0.06
BRD9-208ENST00000489816 LRRC43Q8N309 656 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 GPR26Q8NDV2 337 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 ADAMTS19Q8TE59 1207 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 TMEM169Q96HH4 297 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 LRRC3Q9BY71 257 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 POLR1BQ9H9Y6 1135 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 VPS4AQ9UN37 437 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 CHRM1P11229 460 aaPredicted RBP15.42■□□□□ 0.06
BRD9-208ENST00000489816 WEE1P30291 646 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 GALK1P51570 392 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 ZNF648Q5T619 568 aaPredicted RBP15.42■□□□□ 0.06
BRD9-208ENST00000489816 RGL4Q8IZJ4 473 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 PDZD8Q8NEN9 1154 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 FOXJ1Q92949 421 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 EGLN2Q96KS0 407 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 BRINP2Q9C0B6 783 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 ATG10Q9H0Y0 220 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 CFAP97Q9P2B7 532 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 HSFX1Q9UBD0 423 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 AASSQ9UDR5 926 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 GLYATL1P3A0A0U1RQE8 302 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 TYW5A2RUC4 315 aaKnown RBP15.42■□□□□ 0.06
BRD9-208ENST00000489816 ULK1O75385 1050 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 CDK4P11802 303 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 CYBRD1Q53TN4 286 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 SUSD1Q6UWL2 747 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 ADAMTSL2Q86TH1 951 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 TMBIM1Q969X1 311 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 FAM126AQ9BYI3 521 aaPredicted RBP15.42■□□□□ 0.06
BRD9-208ENST00000489816 CREBZFQ9NS37 354 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 ARL15Q9NXU5 204 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 SMPD3Q9NY59 655 aaPredicted RBP15.42■□□□□ 0.06
BRD9-208ENST00000489816 RIMKLBQ9ULI2 386 aa15.42■□□□□ 0.06
BRD9-208ENST00000489816 ITPKAP23677 461 aa15.41■□□□□ 0.06
BRD9-208ENST00000489816 EMX2Q04743 252 aa15.41■□□□□ 0.06
BRD9-208ENST00000489816 PMS2P3Q13401 168 aa15.41■□□□□ 0.06
BRD9-208ENST00000489816 NKG7Q16617 165 aa15.41■□□□□ 0.06
BRD9-208ENST00000489816 MAPKAPK3Q16644 382 aa15.41■□□□□ 0.06
BRD9-208ENST00000489816 BEND7Q8N7W2 519 aaPredicted RBP15.41■□□□□ 0.06
BRD9-208ENST00000489816 NUSAP1Q9BXS6 441 aaKnown RBP15.41■□□□□ 0.06
BRD9-208ENST00000489816 DPY30Q9C005 99 aa15.41■□□□□ 0.06
BRD9-208ENST00000489816 ACTR8Q9H981 624 aa15.41■□□□□ 0.06
BRD9-208ENST00000489816 HPS4Q9NQG7 708 aa15.41■□□□□ 0.06
BRD9-208ENST00000489816 SLCO3A1Q9UIG8 710 aa15.41■□□□□ 0.06
BRD9-208ENST00000489816 GNGT2O14610 69 aa15.41■□□□□ 0.06
BRD9-208ENST00000489816 OTCP00480 354 aa15.41■□□□□ 0.06
BRD9-208ENST00000489816 MYCLP1P12525 358 aaPredicted RBP15.41■□□□□ 0.06
BRD9-208ENST00000489816 ITGALP20701 1170 aa15.41■□□□□ 0.06
BRD9-208ENST00000489816 POLR2IP36954 125 aaKnown RBP15.41■□□□□ 0.06
BRD9-208ENST00000489816 HTRA3P83110 453 aa15.41■□□□□ 0.06
BRD9-208ENST00000489816 DDX39BQ13838 428 aaKnown RBP15.41■□□□□ 0.06
BRD9-208ENST00000489816 ATP6AP1Q15904 470 aa15.41■□□□□ 0.06
BRD9-208ENST00000489816 PGS1Q32NB8 556 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms