RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 SLC41A2Q96JW4 573 aa24.35■■□□□ 1.49
HMGN1-217ENST00000489072 MAP3K3Q99759 626 aa24.35■■□□□ 1.49
HMGN1-217ENST00000489072 HRASLS2Q9NWW9 162 aa24.35■■□□□ 1.49
HMGN1-217ENST00000489072 HEBP2Q9Y5Z4 205 aa24.35■■□□□ 1.49
HMGN1-217ENST00000489072 COLEC10Q9Y6Z7 277 aa24.35■■□□□ 1.49
HMGN1-217ENST00000489072 OR6C74A6NCV1 312 aa24.34■■□□□ 1.49
HMGN1-217ENST00000489072 OR1I1O60431 355 aa24.34■■□□□ 1.49
HMGN1-217ENST00000489072 ZNF28P17035 718 aa24.34■■□□□ 1.49
HMGN1-217ENST00000489072 NDUFS1P28331 727 aa24.34■■□□□ 1.49
HMGN1-217ENST00000489072 ARCN1P48444 511 aaKnown RBP24.34■■□□□ 1.49
HMGN1-217ENST00000489072 SESN2P58004 480 aaPredicted RBP24.34■■□□□ 1.49
HMGN1-217ENST00000489072 CYP4F2P78329 520 aa24.34■■□□□ 1.49
HMGN1-217ENST00000489072 CRADDP78560 199 aa24.34■■□□□ 1.49
HMGN1-217ENST00000489072 SEMA3AQ14563 771 aa24.34■■□□□ 1.49
HMGN1-217ENST00000489072 C4orf22Q6V702 233 aa24.34■■□□□ 1.49
HMGN1-217ENST00000489072 NLRP9Q7RTR0 991 aa24.34■■□□□ 1.49
HMGN1-217ENST00000489072 OOSP2Q86WS3 158 aa24.34■■□□□ 1.49
HMGN1-217ENST00000489072 REXO1L1PQ8IX06 675 aa24.34■■□□□ 1.49
HMGN1-217ENST00000489072 NLGN4XQ8N0W4 816 aa24.34■■□□□ 1.49
HMGN1-217ENST00000489072 NLGN4YQ8NFZ3 816 aaPredicted RBP24.34■■□□□ 1.49
HMGN1-217ENST00000489072 UBXN4Q92575 508 aa24.34■■□□□ 1.49
HMGN1-217ENST00000489072 NRTNQ99748 197 aa24.34■■□□□ 1.49
HMGN1-217ENST00000489072 CHRAC1Q9NRG0 131 aa24.34■■□□□ 1.49
HMGN1-217ENST00000489072 GSTM1P09488 218 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 CD151P48509 253 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 GSTM4Q03013 218 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 RPA4Q13156 261 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 LY6DQ14210 128 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 KRT33BQ14525 404 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 DNTTIP2Q5QJE6 756 aaKnown RBP24.33■■□□□ 1.49
HMGN1-217ENST00000489072 CERS6Q6ZMG9 384 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 RASGEF1CQ8N431 466 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 PHC3Q8NDX5 983 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 ACVR1CQ8NER5 493 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 PPHLN1Q8NEY8 458 aaKnown RBP24.33■■□□□ 1.49
HMGN1-217ENST00000489072 OR4E2Q8NGC2 313 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 OR6P1Q8NGX9 317 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 OR4L1Q8NH43 312 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.33■■□□□ 1.49
HMGN1-217ENST00000489072 MS4A14Q96JA4 679 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 ELMO2Q96JJ3 720 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 FERD3LQ96RJ6 166 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 SEMA4CQ9C0C4 833 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 HOMER3Q9NSC5 361 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 JRKLQ9Y4A0 524 aa24.33■■□□□ 1.49
HMGN1-217ENST00000489072 ZNF462Q96JM2 2506 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 GCN1Q92616 2671 aaKnown RBP24.32■■□□□ 1.48
HMGN1-217ENST00000489072 LOC101059948A0A1B0GTJ6 334 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 TLCD2A6NGC4 264 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 IFRD1O00458 451 aaPredicted RBP24.32■■□□□ 1.48
HMGN1-217ENST00000489072 MAP4P27816 1152 aaKnown RBP24.32■■□□□ 1.48
HMGN1-217ENST00000489072 KPNA2P52292 529 aaKnown RBP24.32■■□□□ 1.48
HMGN1-217ENST00000489072 IL11RAQ14626 422 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 KCNAB1Q14722 419 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 TRIP13Q15645 432 aaPredicted RBP24.32■■□□□ 1.48
HMGN1-217ENST00000489072 PCID2Q5JVF3 399 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 LYPLAL1Q5VWZ2 237 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 TTC27Q6P3X3 843 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 NAPRTQ6XQN6 538 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 ZSCAN1Q8NBB4 408 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 PEX13Q92968 403 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 SGSM3Q96HU1 749 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 PPM1MQ96MI6 270 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 CD180Q99467 661 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 SLC12A9Q9BXP2 914 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 ULBP3Q9BZM4 244 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 KCNF1Q9H3M0 494 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 BOD1L1Q8NFC6 3051 aa24.32■■□□□ 1.48
HMGN1-217ENST00000489072 TLN1Q9Y490 2541 aaKnown RBP24.31■■□□□ 1.48
HMGN1-217ENST00000489072 TCRBV7S3A2A0A539 114 aa24.31■■□□□ 1.48
HMGN1-217ENST00000489072 QSOX1O00391 747 aa24.31■■□□□ 1.48
HMGN1-217ENST00000489072 FTH1P02794 183 aa24.31■■□□□ 1.48
HMGN1-217ENST00000489072 FGF5P12034 268 aa24.31■■□□□ 1.48
HMGN1-217ENST00000489072 FOLR1P15328 257 aa24.31■■□□□ 1.48
HMGN1-217ENST00000489072 POLR2CP19387 275 aaPredicted RBP24.31■■□□□ 1.48
HMGN1-217ENST00000489072 PRAMEP78395 509 aa24.31■■□□□ 1.48
HMGN1-217ENST00000489072 BOP1Q14137 746 aaKnown RBP24.31■■□□□ 1.48
HMGN1-217ENST00000489072 BRD3Q15059 726 aa24.31■■□□□ 1.48
HMGN1-217ENST00000489072 LINC00303Q3SY05 128 aa24.31■■□□□ 1.48
HMGN1-217ENST00000489072 UNC5BQ8IZJ1 945 aa24.31■■□□□ 1.48
HMGN1-217ENST00000489072 ELMO1Q92556 727 aa24.31■■□□□ 1.48
HMGN1-217ENST00000489072 TFGQ92734 400 aaPredicted RBP24.31■■□□□ 1.48
HMGN1-217ENST00000489072 TREX1Q9NSU2 369 aa24.31■■□□□ 1.48
HMGN1-217ENST00000489072 MARCH4Q9P2E8 410 aaPredicted RBP24.31■■□□□ 1.48
HMGN1-217ENST00000489072 TTC7AQ9ULT0 858 aaPredicted RBP24.31■■□□□ 1.48
HMGN1-217ENST00000489072 SPTBP11277 2137 aa24.31■■□□□ 1.48
HMGN1-217ENST00000489072 UBA6A0AVT1 1052 aaPredicted RBP24.3■■□□□ 1.48
HMGN1-217ENST00000489072 GOLGA6L3A6NEY3 463 aa24.3■■□□□ 1.48
HMGN1-217ENST00000489072 LIN7AO14910 233 aaPredicted RBP24.3■■□□□ 1.48
HMGN1-217ENST00000489072 EBLN1P0CF75 366 aa24.3■■□□□ 1.48
HMGN1-217ENST00000489072 TPSB2P20231 275 aa24.3■■□□□ 1.48
HMGN1-217ENST00000489072 TPSAB1Q15661 275 aa24.3■■□□□ 1.48
HMGN1-217ENST00000489072 FASTKD1Q53R41 847 aaKnown RBP24.3■■□□□ 1.48
HMGN1-217ENST00000489072 ARMC6Q6NXE6 501 aa24.3■■□□□ 1.48
HMGN1-217ENST00000489072 ZNF449Q6P9G9 518 aa24.3■■□□□ 1.48
HMGN1-217ENST00000489072 FBXO38Q6PIJ6 1188 aa24.3■■□□□ 1.48
HMGN1-217ENST00000489072 LDB1Q86U70 411 aaPredicted RBP24.3■■□□□ 1.48
HMGN1-217ENST00000489072 SIDT2Q8NBJ9 832 aaKnown RBP24.3■■□□□ 1.48
HMGN1-217ENST00000489072 OR52E1Q8NGJ3 308 aa24.3■■□□□ 1.48
HMGN1-217ENST00000489072 LCN9Q8WX39 176 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms