RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 ZNF470Q6ECI4 717 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 CYB5D1Q6P9G0 228 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 OTOAQ7RTW8 1153 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 TMEM135Q86UB9 458 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 PDZD3Q86UT5 571 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 OOSP2Q86WS3 158 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 FAM129CQ86XR2 697 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 RCBTB1Q8NDN9 531 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 ZNF248Q8NDW4 579 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 ACVR1CQ8NER5 493 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 GPR150Q8NGU9 434 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 TFGQ92734 400 aaPredicted RBP12.59□□□□□ -0.39
PHF1-210ENST00000488767 RMDN2Q96LZ7 410 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 INSM2Q96T92 566 aaPredicted RBP12.59□□□□□ -0.39
PHF1-210ENST00000488767 TRIM51Q9BSJ1 452 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 CARD6Q9BX69 1037 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 KIR3DX1Q9H7L2 352 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 MVB12BQ9H7P6 319 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 C20orf96Q9NUD7 363 aaPredicted RBP12.59□□□□□ -0.39
PHF1-210ENST00000488767 INTS10Q9NVR2 710 aaKnown RBP12.59□□□□□ -0.39
PHF1-210ENST00000488767 MARCH4Q9P2E8 410 aaPredicted RBP12.59□□□□□ -0.39
PHF1-210ENST00000488767 CDC23Q9UJX2 597 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 UTP11Q9Y3A2 253 aaKnown RBP12.59□□□□□ -0.39
PHF1-210ENST00000488767 MRFAP1Q9Y605 127 aa12.59□□□□□ -0.39
PHF1-210ENST00000488767 ASPMQ8IZT6 3477 aa12.58□□□□□ -0.39
PHF1-210ENST00000488767 PLXNB3Q9ULL4 1909 aa12.58□□□□□ -0.39
PHF1-210ENST00000488767 GOLGA8KD6RF30 607 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 E5RI56 91 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 GOLGA8TH3BQL2 631 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 AGRPO00253 132 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 MATN2O00339 956 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 TOX3O15405 576 aaPredicted RBP12.58□□□□□ -0.4
PHF1-210ENST00000488767 CAPN5O15484 640 aaPredicted RBP12.58□□□□□ -0.4
PHF1-210ENST00000488767 MAP3K7O43318 606 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 URI1O94763 535 aaPredicted RBP12.58□□□□□ -0.4
PHF1-210ENST00000488767 SEC31AO94979 1220 aaKnown RBP12.58□□□□□ -0.4
PHF1-210ENST00000488767 HOXB3P14651 431 aaPredicted RBP12.58□□□□□ -0.4
PHF1-210ENST00000488767 RPS3P23396 243 aaKnown RBP eCLIP12.58□□□□□ -0.4
PHF1-210ENST00000488767 ARL4DP49703 201 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 MAPK10P53779 464 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 RAB15P59190 212 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 HSPA14Q0VDF9 509 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 SEMA3AQ14563 771 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 TYSND1Q2T9J0 566 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 BBS9Q3SYG4 887 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 CAPRIN2Q6IMN6 1127 aaKnown RBP12.58□□□□□ -0.4
PHF1-210ENST00000488767 IRGCQ6NXR0 463 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 TTC23LQ6PF05 361 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 TMPRSS9Q7Z410 1059 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 LDB1Q86U70 411 aaPredicted RBP12.58□□□□□ -0.4
PHF1-210ENST00000488767 CILP2Q8IUL8 1156 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 SPDYE1Q8NFV5 336 aaPredicted RBP12.58□□□□□ -0.4
PHF1-210ENST00000488767 SKA2Q8WVK7 121 aaPredicted RBP12.58□□□□□ -0.4
PHF1-210ENST00000488767 LCN9Q8WX39 176 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 LRRC39Q96DD0 335 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 DCBLD2Q96PD2 775 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 TGM7Q96PF1 710 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 RAB17Q9H0T7 212 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 OR52A5Q9H2C5 316 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 TRIT1Q9H3H1 467 aaKnown RBP12.58□□□□□ -0.4
PHF1-210ENST00000488767 POLG2Q9UHN1 485 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 SLC24A2Q9UI40 661 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 ASF1AQ9Y294 204 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 RAXQ9Y2V3 346 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 PCDHGA7Q9Y5G6 932 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 PRSS21Q9Y6M0 314 aa12.58□□□□□ -0.4
PHF1-210ENST00000488767 MN1Q10571 1320 aaPredicted RBP12.58□□□□□ -0.4
PHF1-210ENST00000488767 MAP1BP46821 2468 aaKnown RBP12.57□□□□□ -0.4
PHF1-210ENST00000488767 ANKRD11Q6UB99 2663 aaPredicted RBP12.57□□□□□ -0.4
PHF1-210ENST00000488767 A8MU76 341 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 HGFP14210 728 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 ITGB6P18564 788 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 CHRM3P20309 590 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 ARNTP27540 789 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 ARCN1P48444 511 aaKnown RBP12.57□□□□□ -0.4
PHF1-210ENST00000488767 ITGA8P53708 1063 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 ADARP55265 1226 aaKnown RBP12.57□□□□□ -0.4
PHF1-210ENST00000488767 DHX9Q08211 1270 aaKnown RBP12.57□□□□□ -0.4
PHF1-210ENST00000488767 C2orf54Q08AI8 447 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 C16orf72Q14CZ0 275 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 WHAMMP3Q1A5X7 153 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 SPANXN3Q5MJ09 141 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 DNTTIP2Q5QJE6 756 aaKnown RBP12.57□□□□□ -0.4
PHF1-210ENST00000488767 BROXQ5VW32 411 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 HIBCHQ6NVY1 386 aaPredicted RBP12.57□□□□□ -0.4
PHF1-210ENST00000488767 DUS1LQ6P1R4 473 aaKnown RBP12.57□□□□□ -0.4
PHF1-210ENST00000488767 ZNF574Q6ZN55 896 aaPredicted RBP12.57□□□□□ -0.4
PHF1-210ENST00000488767 LILRA3Q8N6C8 439 aaPredicted RBP12.57□□□□□ -0.4
PHF1-210ENST00000488767 MNS1Q8NEH6 495 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 SNIP1Q8TAD8 396 aaKnown RBP12.57□□□□□ -0.4
PHF1-210ENST00000488767 SIGLEC10Q96LC7 697 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 C9orf72Q96LT7 481 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 FOPNLQ96NB1 174 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 CD180Q99467 661 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 EBNA1BP2Q99848 306 aaKnown RBP12.57□□□□□ -0.4
PHF1-210ENST00000488767 ASPSCR1Q9BZE9 553 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 B3GNT4Q9C0J1 378 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 RAB33BQ9H082 229 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 SRMSQ9H3Y6 488 aa12.57□□□□□ -0.4
PHF1-210ENST00000488767 PPANQ9NQ55 473 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms