RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 ZNF8P17098 575 aaPredicted RBP19.03■□□□□ 0.64
CCM2-216ENST00000488727 GRK2P25098 689 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 HK3P52790 923 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 TMEM115Q12893 351 aaPredicted RBP19.03■□□□□ 0.64
CCM2-216ENST00000488727 HSP90AA5PQ58FG0 334 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 RD3Q7Z3Z2 195 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 HID1Q8IV36 788 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 CNTN4Q8IWV2 1026 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 PHACTR4Q8IZ21 702 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 SCARF2Q96GP6 870 aaPredicted RBP19.03■□□□□ 0.64
CCM2-216ENST00000488727 NSL1Q96IY1 281 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 BOCQ9BWV1 1114 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 TBC1D10AQ9BXI6 508 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 CYP4F12Q9HCS2 524 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 MOSPD1Q9UJG1 213 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 SUFUQ9UMX1 484 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 DGKBQ9Y6T7 804 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 FAM186AA6NE01 2351 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 IGLV3-16A0A075B6K0 115 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 FCHO1O14526 889 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 CER1O95813 267 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 JUNDP17535 347 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 CALB2P22676 271 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 OR6Y1Q8NGX8 325 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 PPP1R14CQ8TAE6 165 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 EDEM2Q9BV94 578 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 C20orf27Q9GZN8 174 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 FBXO6Q9NRD1 293 aaPredicted RBP19.03■□□□□ 0.64
CCM2-216ENST00000488727 ARL8BQ9NVJ2 186 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 ZDHHC3Q9NYG2 299 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 TMEM216Q9P0N5 145 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 COPG2Q9UBF2 871 aa19.03■□□□□ 0.64
CCM2-216ENST00000488727 PIKFYVEQ9Y2I7 2098 aa19.02■□□□□ 0.64
CCM2-216ENST00000488727 A0A1B0GTQ1 180 aa19.02■□□□□ 0.63
CCM2-216ENST00000488727 CDX4O14627 284 aaPredicted RBP19.02■□□□□ 0.63
CCM2-216ENST00000488727 NUAK1O60285 661 aa19.02■□□□□ 0.63
CCM2-216ENST00000488727 CCDC22O60826 627 aa19.02■□□□□ 0.63
CCM2-216ENST00000488727 CDK14O94921 469 aa19.02■□□□□ 0.63
CCM2-216ENST00000488727 CCND1P24385 295 aa19.02■□□□□ 0.63
CCM2-216ENST00000488727 AKT1P31749 480 aa19.02■□□□□ 0.63
CCM2-216ENST00000488727 RXRGP48443 463 aa19.02■□□□□ 0.63
CCM2-216ENST00000488727 PPM1JQ5JR12 505 aa19.02■□□□□ 0.63
CCM2-216ENST00000488727 WLSQ5T9L3 541 aa19.02■□□□□ 0.63
CCM2-216ENST00000488727 NEPROQ6NW34 567 aa19.02■□□□□ 0.63
CCM2-216ENST00000488727 CMC1Q7Z7K0 106 aa19.02■□□□□ 0.63
CCM2-216ENST00000488727 LCA5Q86VQ0 697 aa19.02■□□□□ 0.63
CCM2-216ENST00000488727 RASGEF1AQ8N9B8 481 aa19.02■□□□□ 0.63
CCM2-216ENST00000488727 COPS8Q99627 209 aa19.02■□□□□ 0.63
CCM2-216ENST00000488727 GPR22Q99680 433 aa19.02■□□□□ 0.63
CCM2-216ENST00000488727 CARS2Q9HA77 564 aaKnown RBP19.02■□□□□ 0.63
CCM2-216ENST00000488727 IARS2Q9NSE4 1012 aaKnown RBP19.02■□□□□ 0.63
CCM2-216ENST00000488727 APOBEC3BQ9UH17 382 aaKnown RBP19.02■□□□□ 0.63
CCM2-216ENST00000488727 PRKAB1Q9Y478 270 aa19.02■□□□□ 0.63
CCM2-216ENST00000488727 GVINP1Q7Z2Y8 2422 aa19.01■□□□□ 0.63
CCM2-216ENST00000488727 A8MUI8 341 aa19.01■□□□□ 0.63
CCM2-216ENST00000488727 VEGFDO43915 354 aa19.01■□□□□ 0.63
CCM2-216ENST00000488727 SDC3O75056 442 aa19.01■□□□□ 0.63
CCM2-216ENST00000488727 RASGRP1O95267 797 aa19.01■□□□□ 0.63
CCM2-216ENST00000488727 F7P08709 466 aaPredicted RBP19.01■□□□□ 0.63
CCM2-216ENST00000488727 MSH3P20585 1137 aa19.01■□□□□ 0.63
CCM2-216ENST00000488727 GNPDA1P46926 289 aa19.01■□□□□ 0.63
CCM2-216ENST00000488727 ARRB1P49407 418 aaPredicted RBP19.01■□□□□ 0.63
CCM2-216ENST00000488727 CTSCP53634 463 aa19.01■□□□□ 0.63
CCM2-216ENST00000488727 ATXN3P54252 364 aaPredicted RBP19.01■□□□□ 0.63
CCM2-216ENST00000488727 BNIP3Q12983 259 aa19.01■□□□□ 0.63
CCM2-216ENST00000488727 PYCR3Q53H96 274 aa19.01■□□□□ 0.63
CCM2-216ENST00000488727 ZNF547Q8IVP9 402 aa19.01■□□□□ 0.63
CCM2-216ENST00000488727 OXR1Q8N573 874 aa19.01■□□□□ 0.63
CCM2-216ENST00000488727 GPR150Q8NGU9 434 aa19.01■□□□□ 0.63
CCM2-216ENST00000488727 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.01■□□□□ 0.632e-6■■■■■ 54.9
CCM2-216ENST00000488727 VPS39Q96JC1 886 aa19.01■□□□□ 0.63
CCM2-216ENST00000488727 LRRC61Q9BV99 259 aa19.01■□□□□ 0.63
CCM2-216ENST00000488727 RHOJQ9H4E5 214 aa19.01■□□□□ 0.63
CCM2-216ENST00000488727 ZNF395Q9H8N7 513 aaPredicted RBP19.01■□□□□ 0.63
CCM2-216ENST00000488727 ZFC3H1O60293 1989 aaKnown RBP19.01■□□□□ 0.63
CCM2-216ENST00000488727 A0A096LPK6 155 aa19■□□□□ 0.63
CCM2-216ENST00000488727 SGTAO43765 313 aa19■□□□□ 0.63
CCM2-216ENST00000488727 GDF9O60383 454 aa19■□□□□ 0.63
CCM2-216ENST00000488727 OR1I1O60431 355 aa19■□□□□ 0.63
CCM2-216ENST00000488727 SLC1A6P48664 564 aa19■□□□□ 0.63
CCM2-216ENST00000488727 AQP5P55064 265 aa19■□□□□ 0.63
CCM2-216ENST00000488727 TCEA2Q15560 299 aa19■□□□□ 0.63
CCM2-216ENST00000488727 TBCCQ15814 346 aa19■□□□□ 0.63
CCM2-216ENST00000488727 AASDHQ4L235 1098 aaPredicted RBP19■□□□□ 0.63
CCM2-216ENST00000488727 ZNF470Q6ECI4 717 aa19■□□□□ 0.63
CCM2-216ENST00000488727 CERS6Q6ZMG9 384 aa19■□□□□ 0.63
CCM2-216ENST00000488727 ZCCHC23Q6ZST2 131 aa19■□□□□ 0.63
CCM2-216ENST00000488727 DET1Q7L5Y6 550 aa19■□□□□ 0.63
CCM2-216ENST00000488727 DENND6AQ8IWF6 608 aa19■□□□□ 0.63
CCM2-216ENST00000488727 PIWIL2Q8TC59 973 aaKnown RBP19■□□□□ 0.63
CCM2-216ENST00000488727 PRR11Q96HE9 360 aaPredicted RBP19■□□□□ 0.63
CCM2-216ENST00000488727 ZCCHC2Q9C0B9 1178 aaKnown RBP19■□□□□ 0.63
CCM2-216ENST00000488727 NMUR2Q9GZQ4 415 aa19■□□□□ 0.63
CCM2-216ENST00000488727 TMEM168Q9H0V1 697 aa19■□□□□ 0.63
CCM2-216ENST00000488727 TM7SF3Q9NS93 570 aa19■□□□□ 0.63
CCM2-216ENST00000488727 MID2Q9UJV3 735 aa19■□□□□ 0.63
CCM2-216ENST00000488727 ST14Q9Y5Y6 855 aa19■□□□□ 0.63
CCM2-216ENST00000488727 OR2AG2A6NM03 316 aa19■□□□□ 0.63
CCM2-216ENST00000488727 CAPN14A8MX76 684 aa19■□□□□ 0.63
CCM2-216ENST00000488727 GPR89AB7ZAQ6 455 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms