RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 GSTA2P09210 222 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 GSTM1P09488 218 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 GLB1P16278 677 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 AOAHP28039 575 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 STX2P32856 288 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 SLC19A1P41440 591 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 MAPK9P45984 424 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 FASLGP48023 281 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 PGGT1BP53609 377 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 GSTM4Q03013 218 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 KBTBD12Q3ZCT8 623 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 N4BP2L1Q5TBK1 243 aaPredicted RBP10.8□□□□□ -0.68
UBE4B-210ENST00000488228 CEP128Q6ZU80 1094 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 C3orf62Q6ZUJ4 267 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 OTOAQ7RTW8 1153 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 STRA8Q7Z7C7 330 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 GALNT7Q86SF2 657 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 CTAGE3PQ8IX95 158 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 SLC22A15Q8IZD6 547 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 ZBTB2Q8N680 514 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 GPATCH11Q8N954 259 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 GABPB2Q8TAK5 448 aaPredicted RBP10.8□□□□□ -0.68
UBE4B-210ENST00000488228 CXorf40BQ96DE9 158 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 PANX3Q96QZ0 392 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 GPR21Q99679 349 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 AARSD1Q9BTE6 412 aaKnown RBP10.8□□□□□ -0.68
UBE4B-210ENST00000488228 HGH1Q9BTY7 390 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 STN1Q9H668 368 aaKnown RBP10.8□□□□□ -0.68
UBE4B-210ENST00000488228 POT1Q9NUX5 634 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 CDYLQ9Y232 598 aa10.8□□□□□ -0.68
UBE4B-210ENST00000488228 APOBEC2Q9Y235 224 aaKnown RBP10.8□□□□□ -0.68
UBE4B-210ENST00000488228 OR5K4A6NMS3 321 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 OPA1O60313 960 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 SPAG6O75602 509 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 TOP3BO95985 862 aaKnown RBP10.79□□□□□ -0.68
UBE4B-210ENST00000488228 VIPP01282 170 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 GP1BAP07359 652 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 XRCC1P18887 633 aaPredicted RBP10.79□□□□□ -0.68
UBE4B-210ENST00000488228 CHRM3P20309 590 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 TNFRSF8P28908 595 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 CSF2RBP32927 897 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 CLCN7P51798 805 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 CDKN2DP55273 166 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 OR1D5P58170 312 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 VSNL1P62760 191 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 FOXC1Q12948 553 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 RPA4Q13156 261 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 GPR18Q14330 331 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 NR1D2Q14995 579 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 AMZ1Q400G9 498 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 HES3Q5TGS1 186 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 NKAIN2Q5VXU1 208 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 CAPRIN2Q6IMN6 1127 aaKnown RBP10.79□□□□□ -0.68
UBE4B-210ENST00000488228 SLC9B2Q86UD5 537 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 SLC26A11Q86WA9 606 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 ZC3HC1Q86WB0 502 aaKnown RBP10.79□□□□□ -0.68
UBE4B-210ENST00000488228 MARCH9Q86YJ5 346 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 RELL1Q8IUW5 271 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 PPM1NQ8N819 430 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 ACVR1CQ8NER5 493 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 UHMK1Q8TAS1 419 aaKnown RBP10.79□□□□□ -0.68
UBE4B-210ENST00000488228 CD200R1Q8TD46 325 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 ASZ1Q8WWH4 475 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 CDKL2Q92772 493 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 KCNJ9Q92806 393 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 MRRFQ96E11 262 aaKnown RBP10.79□□□□□ -0.68
UBE4B-210ENST00000488228 VPS39Q96JC1 886 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 OLFM1Q99784 485 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 TBC1D10AQ9BXI6 508 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 ZMYND15Q9H091 742 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 TSPYL1Q9H0U9 437 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 KCNK4Q9NYG8 393 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 PCDHGA1Q9Y5H4 931 aa10.79□□□□□ -0.68
UBE4B-210ENST00000488228 CHD8Q9HCK8 2581 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 FAM95CA0A1B0GW59 222 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 A0A1W2PQM1 296 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 KRT87PA6NCN2 255 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 D6RAR5 112 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 IFRD1O00458 451 aaPredicted RBP10.78□□□□□ -0.68
UBE4B-210ENST00000488228 VPS26AO75436 327 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 GPC4O75487 556 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 FAM155BO75949 473 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 FDXRP22570 491 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 ACADLP28330 430 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 ALDH4A1P30038 563 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 BDKRB1P46663 353 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 PPM1FP49593 454 aaPredicted RBP10.78□□□□□ -0.68
UBE4B-210ENST00000488228 PDX1P52945 283 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 CCL7P80098 99 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 TIAL1Q01085 375 aaKnown RBP eCLIP10.78□□□□□ -0.68
UBE4B-210ENST00000488228 INSM1Q01101 510 aaPredicted RBP10.78□□□□□ -0.68
UBE4B-210ENST00000488228 ILKQ13418 452 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 ZNF460Q14592 562 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 PLCL1Q15111 1095 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 ERCC6LQ2NKX8 1250 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 MAP9Q49MG5 647 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 ACSBG2Q5FVE4 666 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 HECTD2Q5U5R9 776 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 ZNF449Q6P9G9 518 aa10.78□□□□□ -0.68
UBE4B-210ENST00000488228 TMEM26Q6ZUK4 368 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms