RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 OCIAD1Q9NX40 245 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 FOXJ2Q9P0K8 574 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 PCDHGA7Q9Y5G6 932 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 HEBP2Q9Y5Z4 205 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 ANKRD12Q6UB98 2062 aa23.11■■□□□ 1.29
RHBDD3-205ENST00000488106 RASSF9O75901 435 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 C9P02748 559 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 SPTBP11277 2137 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 PTGIRP43119 386 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 CSE1LP55060 971 aaKnown RBP23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 PPP1CAP62136 330 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 RNASEH2BQ5TBB1 312 aaKnown RBP23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 FAM92BQ6ZTR7 304 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 ARHGAP22Q7Z5H3 698 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 LKAAEAR1Q8TD35 194 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 SLCO2A1Q92959 643 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 ART4Q93070 314 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 PMEPA1Q969W9 287 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 ZNF669Q96BR6 464 aaPredicted RBP23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 C9orf72Q96LT7 481 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 FERD3LQ96RJ6 166 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 KIR3DX1Q9H7L2 352 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 KCND1Q9NSA2 647 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 IL1RAPL1Q9NZN1 696 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 SLC24A2Q9UI40 661 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 COLEC10Q9Y6Z7 277 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 MGAQ8IWI9 3026 aa23.1■■□□□ 1.29
RHBDD3-205ENST00000488106 C9orf172C9J069 976 aa23.09■■□□□ 1.29
RHBDD3-205ENST00000488106 F8W8V4 182 aa23.09■■□□□ 1.29
RHBDD3-205ENST00000488106 LIN7AO14910 233 aaPredicted RBP23.09■■□□□ 1.29
RHBDD3-205ENST00000488106 PAFAH1B1P43034 410 aa23.09■■□□□ 1.29
RHBDD3-205ENST00000488106 RPA4Q13156 261 aa23.09■■□□□ 1.29
RHBDD3-205ENST00000488106 KIAA0930Q6ICG6 404 aaPredicted RBP23.09■■□□□ 1.29
RHBDD3-205ENST00000488106 PDZD3Q86UT5 571 aa23.09■■□□□ 1.29
RHBDD3-205ENST00000488106 CRELD1Q96HD1 420 aa23.09■■□□□ 1.29
RHBDD3-205ENST00000488106 MAD1L1Q9Y6D9 718 aa23.09■■□□□ 1.29
RHBDD3-205ENST00000488106 LOC400499M0QZD8 3231 aa23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 PCM1Q15154 2024 aa23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 UBA6A0AVT1 1052 aaPredicted RBP23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 SDR42E2A6NKP2 422 aa23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 IQCF5A8MTL0 148 aa23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 DNALI1O14645 258 aaPredicted RBP23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 PRMT5O14744 637 aaPredicted RBP23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 NVLO15381 856 aaKnown RBP23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 KLK10O43240 276 aa23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 NDUFS3O75489 264 aa23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 PAMP19021 973 aa23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 DR1Q01658 176 aa23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 IZUMO3Q5VZ72 239 aa23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 KLHL35Q6PF15 583 aa23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 KRT222Q8N1A0 295 aa23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 HGH1Q9BTY7 390 aa23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 TSSK1BQ9BXA7 367 aa23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 SLC39A1Q9NY26 324 aa23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 RALYQ9UKM9 306 aaKnown RBP23.08■■□□□ 1.29
RHBDD3-205ENST00000488106 FAM237BA0A1B0GVD1 139 aa23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 KIF1CO43896 1103 aaKnown RBP23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 NDUFS1P28331 727 aa23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 CASQ1P31415 396 aa23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 MAGEA3P43357 314 aa23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 ARCN1P48444 511 aaKnown RBP23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 SEPHS1P49903 392 aa23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 EIF3BP55884 814 aaKnown RBP23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 DHX34Q14147 1143 aaKnown RBP23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 TMEM164Q5U3C3 297 aa23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 PTRHD1Q6GMV3 140 aaKnown RBP23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 MRNIPQ6NTE8 343 aa23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 AGGF1Q8N302 714 aaeCLIP23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 PHC3Q8NDX5 983 aa23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 ZDHHC12Q96GR4 267 aa23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 RUNDC3BQ96NL0 473 aa23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 FCRL3Q96P31 734 aaPredicted RBP23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 TAAR9Q96RI9 348 aa23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 TRIM51Q9BSJ1 452 aa23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 GNPTGQ9UJJ9 305 aa23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 LHX6Q9UPM6 363 aa23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 RPS6KL1Q9Y6S9 549 aa23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 IGSF10Q6WRI0 2623 aa23.07■■□□□ 1.28
RHBDD3-205ENST00000488106 OR5K3A6NET4 321 aa23.06■■□□□ 1.28
RHBDD3-205ENST00000488106 CCDC188H7C350 402 aa23.06■■□□□ 1.28
RHBDD3-205ENST00000488106 ANKRD34CP0C6C1 535 aa23.06■■□□□ 1.28
RHBDD3-205ENST00000488106 CD151P48509 253 aa23.06■■□□□ 1.28
RHBDD3-205ENST00000488106 TLE3Q04726 772 aa23.06■■□□□ 1.28
RHBDD3-205ENST00000488106 ANKRD20A4Q4UJ75 823 aa23.06■■□□□ 1.28
RHBDD3-205ENST00000488106 CACHD1Q5VU97 1274 aa23.06■■□□□ 1.28
RHBDD3-205ENST00000488106 ARMC3Q5W041 872 aa23.06■■□□□ 1.28
RHBDD3-205ENST00000488106 SYT10Q6XYQ8 523 aa23.06■■□□□ 1.28
RHBDD3-205ENST00000488106 OOSP2Q86WS3 158 aa23.06■■□□□ 1.28
RHBDD3-205ENST00000488106 ZFAND4Q86XD8 727 aa23.06■■□□□ 1.28
RHBDD3-205ENST00000488106 BMPERQ8N8U9 685 aa23.06■■□□□ 1.28
RHBDD3-205ENST00000488106 ACVR1CQ8NER5 493 aa23.06■■□□□ 1.28
RHBDD3-205ENST00000488106 ZFPM2Q8WW38 1151 aa23.06■■□□□ 1.28
RHBDD3-205ENST00000488106 TFGQ92734 400 aaPredicted RBP23.06■■□□□ 1.28
RHBDD3-205ENST00000488106 B3GALT1Q9Y5Z6 326 aa23.06■■□□□ 1.28
RHBDD3-205ENST00000488106 SLC5A10A0PJK1 596 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 OR6C74A6NCV1 312 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 TTI1O43156 1089 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 CCR7P32248 378 aa23.05■■□□□ 1.28
RHBDD3-205ENST00000488106 PRKG2Q13237 762 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms