RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 ZNF548Q8NEK5 533 aaPredicted RBP4.41□□□□□ -1.7
CNN3-206ENST00000487539 ABHD11Q8NFV4 315 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 SPATA3Q8NHX4 192 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 WFDC5Q8TCV5 224 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 APOBEC4Q8WW27 367 aaKnown RBP4.41□□□□□ -1.7
CNN3-206ENST00000487539 KIFAP3Q92845 792 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 C8orf48Q96LL4 319 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 SYT15Q9BQS2 421 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 DPEP3Q9H4B8 488 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 SH3GLB2Q9NR46 395 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 CYTH4Q9UIA0 394 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 CPSF3Q9UKF6 684 aaKnown RBP4.41□□□□□ -1.7
CNN3-206ENST00000487539 NCKAP1Q9Y2A7 1128 aa4.41□□□□□ -1.7
CNN3-206ENST00000487539 MYO7BQ6PIF6 2116 aa4.4□□□□□ -1.7
CNN3-206ENST00000487539 VWA3AA6NCI4 1184 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 LINC01548A6NM66 108 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 TTC34A8MYJ7 566 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 ANKRD63C9JTQ0 380 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 D6RAR5 112 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 E9PMD0 336 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 SLC31A1O15431 190 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 RGS10O43665 173 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 ZG16O60844 167 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 SRGAP2O75044 1071 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 FAM155BO75949 473 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 RASAL1O95294 804 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 BAG4O95429 457 aaKnown RBP4.4□□□□□ -1.71
CNN3-206ENST00000487539 RPLP0P05388 317 aaKnown RBP4.4□□□□□ -1.71
CNN3-206ENST00000487539 HMBSP08397 361 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 IFNAR1P17181 557 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 F8A1P23610 371 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 ANXA13P27216 316 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 EPHA3P29320 983 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 DRD3P35462 400 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 PPP3CCP48454 512 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 TRAPPC10P48553 1259 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 PSMD8P48556 350 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 SGSHP51688 502 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 PROK1P58294 105 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 RPS16P62249 146 aaKnown RBP4.4□□□□□ -1.71
CNN3-206ENST00000487539 AKAP17AQ02040 695 aaKnown RBP4.4□□□□□ -1.71
CNN3-206ENST00000487539 ZFP36L1Q07352 338 aaKnown RBP4.4□□□□□ -1.71
CNN3-206ENST00000487539 SLC10A2Q12908 348 aaPredicted RBP4.4□□□□□ -1.71
CNN3-206ENST00000487539 ARHGEF7Q14155 803 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 FZD2Q14332 565 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 SLC29A2Q14542 456 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 CALCRLQ16602 461 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 TTC31Q49AM3 519 aaPredicted RBP4.4□□□□□ -1.71
CNN3-206ENST00000487539 C9orf64Q5T6V5 341 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 CACHD1Q5VU97 1274 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 SNX30Q5VWJ9 437 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 VSTM1Q6UX27 236 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 CRELD2Q6UXH1 353 aaPredicted RBP4.4□□□□□ -1.71
CNN3-206ENST00000487539 PAQR9Q6ZVX9 377 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 CHST9Q7L1S5 443 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 IQCHQ86VS3 1027 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 CCDC13Q8IYE1 715 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 RBFAQ8N0V3 343 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 STK40Q8N2I9 435 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 SDR16C5Q8N3Y7 309 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 Q8N9P0 234 aaPredicted RBP4.4□□□□□ -1.71
CNN3-206ENST00000487539 SEMA6DQ8NFY4 1073 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 LMX1AQ8TE12 382 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 TMEM171Q8WVE6 324 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 SLITRK1Q96PX8 696 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 SMR3AQ99954 134 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 OMDQ99983 421 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 CALN1Q9BXU9 219 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 RNF26Q9BY78 433 aaPredicted RBP4.4□□□□□ -1.71
CNN3-206ENST00000487539 SLC29A3Q9BZD2 475 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 TRIM5Q9C035 493 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 FAM83DQ9H4H8 585 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 NMUR1Q9HB89 426 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 USP29Q9HBJ7 922 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 TUFT1Q9NNX1 390 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 IL37Q9NZH6 218 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 SH3BP4Q9P0V3 963 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 USP22Q9UPT9 525 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 SNX9Q9Y5X1 595 aa4.4□□□□□ -1.71
CNN3-206ENST00000487539 MAP1AP78559 2803 aaPredicted RBP4.39□□□□□ -1.71
CNN3-206ENST00000487539 AQP7P3A6NL99 342 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 M0R3H8 397 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 RNF103O00237 685 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 OGTO15294 1046 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 HUS1O60921 280 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 BEST1O76090 585 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 IGHDP01880 384 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 ALPPL2P10696 532 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 FGF3P11487 239 aaPredicted RBP4.39□□□□□ -1.71
CNN3-206ENST00000487539 GCFC2P16383 781 aaKnown RBP4.39□□□□□ -1.71
CNN3-206ENST00000487539 GOT1P17174 413 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 ACVR2AP27037 513 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 HOXD9P28356 352 aaPredicted RBP4.39□□□□□ -1.71
CNN3-206ENST00000487539 CDC25AP30304 524 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 CCKBRP32239 447 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 CD70P32970 193 aa4.39□□□□□ -1.71
CNN3-206ENST00000487539 PTDSS1P48651 473 aaKnown RBP4.39□□□□□ -1.71
CNN3-206ENST00000487539 SUMO2P61956 95 aaKnown RBP4.39□□□□□ -1.71
CNN3-206ENST00000487539 HOXA4Q00056 320 aaPredicted RBP4.39□□□□□ -1.71
CNN3-206ENST00000487539 LTBQ06643 244 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms