RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 SLC29A2Q14542 456 aa18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 BRD3Q15059 726 aa18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 RPE65Q16518 533 aa18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 SYTL3Q4VX76 610 aa18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 NAPRTQ6XQN6 538 aa18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 SLC9B2Q86UD5 537 aa18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 ZBTB2Q8N680 514 aa18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 NAT6Q93015 286 aa18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 CAVIN3Q969G5 261 aa18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 VPS39Q96JC1 886 aa18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 RMDN2Q96LZ7 410 aa18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 INSM2Q96T92 566 aaPredicted RBP18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 NDNQ99608 321 aa18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 POT1Q9NUX5 634 aa18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 CPNE7Q9UBL6 633 aa18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 PSMD13Q9UNM6 376 aa18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 DNAH14Q0VDD8 3507 aa18.95■□□□□ 0.62
PCOLCE-208ENST00000487172 TRBV23OR9-2A0A075B6M9 112 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 FAM95CA0A1B0GW59 222 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 EIF3FO00303 357 aaPredicted RBP18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 IFRD1O00458 451 aaPredicted RBP18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 FDXRP22570 491 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 ACADLP28330 430 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 LIMK2P53671 638 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 MAZP56270 477 aaKnown RBP18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 ILKQ13418 452 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 NR1D2Q14995 579 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 EFTUD2Q15029 972 aaKnown RBP eCLIP18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 TTLL9Q3SXZ7 439 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 ZNF438Q7Z4V0 828 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 PDZD3Q86UT5 571 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 RBM12BQ8IXT5 1001 aaKnown RBP18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 GPATCH11Q8N954 259 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 SPDYE1Q8NFV5 336 aaPredicted RBP18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 CD200R1Q8TD46 325 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 ZFPM2Q8WW38 1151 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 SLC44A1Q8WWI5 657 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 SH3KBP1Q96B97 665 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 GPR21Q99679 349 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 GPR22Q99680 433 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 STN1Q9H668 368 aaKnown RBP18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 FETUBQ9UGM5 382 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 PCDHGA1Q9Y5H4 931 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 HEBP2Q9Y5Z4 205 aa18.94■□□□□ 0.62
PCOLCE-208ENST00000487172 FRYLO94915 3013 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 OR52A4PA6NMU1 304 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 PPM1DO15297 605 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 VIPP01282 170 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 GP1BAP07359 652 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 CBSLP0DN79 551 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 MTHFD1P11586 935 aaKnown RBP18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 MYF5P13349 255 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 CBSP35520 551 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 ACADVLP49748 655 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 CDKN2DP55273 166 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 HHEXQ03014 270 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 DNAJC3Q13217 504 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 NEK10Q6ZWH5 1172 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 VRK3Q8IV63 474 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 SIDT2Q8NBJ9 832 aaKnown RBP18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 GIMAP7Q8NHV1 300 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 TFGQ92734 400 aaPredicted RBP18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 CXorf40BQ96DE9 158 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 ATXN7L3BQ96GX2 97 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 C12orf66Q96MD2 445 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 SLC30A3Q99726 388 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 UCK1Q9HA47 277 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 LRIT1Q9P2V4 623 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 TRMT6Q9UJA5 497 aaKnown RBP18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 MTO1Q9Y2Z2 717 aaKnown RBP18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 RNF215Q9Y6U7 377 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 LAMA1P25391 3075 aa18.93■□□□□ 0.62
PCOLCE-208ENST00000487172 PIEZO1Q92508 2521 aa18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 KCNK5O95279 499 aa18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 ENO3P13929 434 aaPredicted RBP18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 NDUFS1P28331 727 aa18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 GPR3P46089 330 aa18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 POU4F1Q01851 419 aa18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 PUM1Q14671 1186 aaKnown RBP eCLIP18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 GUSBP11Q6P575 273 aa18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 EFL1Q7Z2Z2 1120 aaKnown RBP18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 CNPY4Q8N129 248 aa18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 UBLCP1Q8WVY7 318 aaPredicted RBP18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 FAM136AQ96C01 138 aa18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 ELMO2Q96JJ3 720 aa18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 OLFM1Q99784 485 aa18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 POPDC3Q9HBV1 291 aa18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 SLC40A1Q9NP59 571 aa18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 TOR4AQ9NXH8 423 aa18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 ZNF180Q9UJW8 692 aa18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 COLEC10Q9Y6Z7 277 aa18.92■□□□□ 0.62
PCOLCE-208ENST00000487172 EXOC1LA0A1B0GW35 172 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 CPED1A4D0V7 1026 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 FAM155BO75949 473 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 DKK1O94907 266 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 ITGA2BP08514 1039 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 CDK4P11802 303 aa18.91■□□□□ 0.62
PCOLCE-208ENST00000487172 MSH2P43246 934 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms