RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 ARIH2O95376 493 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 MATN4O95460 622 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 MT-ND2P03891 347 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 TSPAN19P0C672 248 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 G6PDP11413 515 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 ITGALP20701 1170 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 GGT5P36269 586 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 LEPRP48357 1165 aaKnown RBP7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 CXCR3P49682 368 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 SCN1BQ07699 218 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 CLCA4Q14CN2 919 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 ZNF181Q2M3W8 571 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 C6orf136Q5SQH8 315 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 ZNF57Q68EA5 555 aaPredicted RBP7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 FAM131AQ6UXB0 335 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 MMAAQ8IVH4 418 aaKnown RBP7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 CADM3Q8N126 398 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 PNPLA1Q8N8W4 532 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 ANKRD49Q8WVL7 239 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 FBXO32Q969P5 355 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 ZNF486Q96H40 463 aaPredicted RBP7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 NMRK2Q9NPI5 230 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 AIG1Q9NVV5 245 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 SH3BP4Q9P0V3 963 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 SPASTQ9UBP0 616 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 MGAT4DA6NG13 374 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 E9PAM4 449 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 H3BN98 237 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 MYL12BO14950 172 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 NUAK1O60285 661 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 KPNA6O60684 536 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 EEDO75530 441 aaKnown RBP7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 COL6A1P12109 1028 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 COX7A2P14406 83 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 CSNK2BP67870 215 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 PYDC2Q56P42 97 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 PAGE3Q5JUK9 113 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 DGKKQ5KSL6 1271 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 AGAP7PQ5VUJ5 663 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 RAP1GAP2Q684P5 730 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 EIF3MQ7L2H7 374 aaKnown RBP7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 RRM2BQ7LG56 351 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 CTU1Q7Z7A3 348 aaKnown RBP7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 SLC44A2Q8IWA5 706 aaPredicted RBP7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 STK40Q8N2I9 435 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 NDNFQ8TB73 568 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 EXOC2Q96KP1 924 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 CNDP2Q96KP4 475 aaKnown RBP7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 MRM3Q9HC36 420 aaKnown RBP7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 CLN6Q9NWW5 311 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 C1orf109Q9NX04 203 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 MKLN1Q9UL63 735 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 A8MV72 311 aaPredicted RBP7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 TEX28O15482 410 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 CNTN5O94779 1100 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 IL6P05231 212 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 ALDOCP09972 364 aaKnown RBP7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 AQP1P29972 269 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 IFNA8P32881 189 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 SHMT2P34897 504 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 PPP3CCP48454 512 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 ZNF45Q02386 682 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 PHKG1Q16816 387 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 ZNF789Q5FWF6 425 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 MZT2BQ6NZ67 158 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 ZNF517Q6ZMY9 492 aaPredicted RBP7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 ISCA2Q86U28 154 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 OR13C4Q8NGS5 318 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 OTULINQ96BN8 352 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 C12orf42Q96LP6 360 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 VPS35Q96QK1 796 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 C1QTNF1Q9BXJ1 281 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 TEX12Q9BXU0 123 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 OR2B2Q9GZK3 357 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 OSBPL2Q9H1P3 480 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 TP63Q9H3D4 680 aaPredicted RBP7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 RETREG1Q9H6L5 497 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 TLR8Q9NR97 1041 aaKnown RBP7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 ZNF490Q9ULM2 529 aaPredicted RBP7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 RNF6Q9Y252 685 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 PCDHGA11Q9Y5H2 935 aa7.55□□□□□ -1.2
COL6A4P1-202ENST00000487147 ARPC4-TTLL3A0A0A6YYG9 625 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 GNG14A0A1W2PPG7 69 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 FAM172BPA6NC97 362 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 CDC7O00311 574 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 SUV39H1O43463 412 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 MTRF1O75570 445 aaKnown RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 CREG1O75629 220 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 IFNA14P01570 189 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 LPOP22079 712 aaPredicted RBP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 GABRB3P28472 473 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 MC4RP32245 332 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 HSPA7P48741 367 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 OXA1LQ15070 435 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 TJAP1Q5JTD0 557 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 OR2T5Q6IEZ7 315 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 CASP12Q6UXS9 341 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 PELI3Q8N2H9 469 aa7.54□□□□□ -1.2
COL6A4P1-202ENST00000487147 LIX1Q8N485 282 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms