RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 UBL4BQ8N7F7 174 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 HM13Q8TCT9 377 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 PPP1R2P1Q96PQ5 205 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 RUFY1Q96T51 708 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 CD180Q99467 661 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 BAG1Q99933 345 aaPredicted RBP23.92■■□□□ 1.42
LIME1-206ENST00000487026 DESI2Q9BSY9 194 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 KCNMB2Q9Y691 235 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 COLEC10Q9Y6Z7 277 aa23.92■■□□□ 1.42
LIME1-206ENST00000487026 TCRBV7S2A1N4TA0A589 114 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 PIPSLA2A3N6 862 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 CDC14CA4D256 554 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 GOLGA6L9A6NEM1 432 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 CFAP99D6REC4 459 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 MT-ND3P03897 115 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 GDF10P55107 478 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 SEPT6Q14141 434 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 COLEC12Q5KU26 742 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 SERPINA9Q86WD7 417 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 KMT5CQ86Y97 462 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 TMEM139Q8IV31 216 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 LRRC45Q96CN5 670 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 FERD3LQ96RJ6 166 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 CCM2Q9BSQ5 444 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 TWSG1Q9GZX9 223 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 ZDHHC3Q9NYG2 299 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 FEZ2Q9UHY8 353 aaPredicted RBP23.91■■□□□ 1.42
LIME1-206ENST00000487026 KCND3Q9UK17 655 aa23.91■■□□□ 1.42
LIME1-206ENST00000487026 CREG1O75629 220 aa23.9■■□□□ 1.42
LIME1-206ENST00000487026 POU6F1Q14863 301 aa23.9■■□□□ 1.42
LIME1-206ENST00000487026 GPR33Q49SQ1 333 aa23.9■■□□□ 1.42
LIME1-206ENST00000487026 GAS2L3Q86XJ1 694 aa23.9■■□□□ 1.42
LIME1-206ENST00000487026 CLDN19Q8N6F1 224 aa23.9■■□□□ 1.42
LIME1-206ENST00000487026 TTC13Q8NBP0 860 aa23.9■■□□□ 1.42
LIME1-206ENST00000487026 PHC3Q8NDX5 983 aa23.9■■□□□ 1.42
LIME1-206ENST00000487026 TMEM121Q9BTD3 319 aa23.9■■□□□ 1.42
LIME1-206ENST00000487026 COG4Q9H9E3 785 aa23.9■■□□□ 1.42
LIME1-206ENST00000487026 NLE1Q9NVX2 485 aaPredicted RBP23.9■■□□□ 1.42
LIME1-206ENST00000487026 UBR5O95071 2799 aaPredicted RBP23.89■■□□□ 1.42
LIME1-206ENST00000487026 CCDC78A2IDD5 438 aa23.89■■□□□ 1.41
LIME1-206ENST00000487026 ZBTB11O95625 1053 aaPredicted RBP23.89■■□□□ 1.41
LIME1-206ENST00000487026 ACRV1P26436 265 aa23.89■■□□□ 1.41
LIME1-206ENST00000487026 PDHA2P29803 388 aa23.89■■□□□ 1.41
LIME1-206ENST00000487026 KLF1Q13351 362 aaPredicted RBP23.89■■□□□ 1.41
LIME1-206ENST00000487026 PIANPQ8IYJ0 282 aa23.89■■□□□ 1.41
LIME1-206ENST00000487026 HEXDCQ8WVB3 486 aa23.89■■□□□ 1.41
LIME1-206ENST00000487026 LCN9Q8WX39 176 aa23.89■■□□□ 1.41
LIME1-206ENST00000487026 CDKN2AIPNLQ96HQ2 116 aa23.89■■□□□ 1.41
LIME1-206ENST00000487026 FCRL4Q96PJ5 515 aa23.89■■□□□ 1.41
LIME1-206ENST00000487026 C19orf43Q9BQ61 176 aa23.89■■□□□ 1.41
LIME1-206ENST00000487026 EPN3Q9H201 632 aa23.89■■□□□ 1.41
LIME1-206ENST00000487026 LRRC40Q9H9A6 602 aa23.89■■□□□ 1.41
LIME1-206ENST00000487026 KCND1Q9NSA2 647 aa23.89■■□□□ 1.41
LIME1-206ENST00000487026 SOHLH2Q9NX45 425 aa23.89■■□□□ 1.41
LIME1-206ENST00000487026 PCDHGA6Q9Y5G7 932 aa23.89■■□□□ 1.41
LIME1-206ENST00000487026 HEBP2Q9Y5Z4 205 aa23.89■■□□□ 1.41
LIME1-206ENST00000487026 IGLV3-16A0A075B6K0 115 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 TRBV5-4A0A0C4DH59 114 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 C17orf113A0A1B0GUU1 675 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 SLC9B1P1A6NJY1 282 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 MIF4GDA9UHW6 222 aaKnown RBP23.88■■□□□ 1.41
LIME1-206ENST00000487026 NR1D1P20393 614 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 NDUFS1P28331 727 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 PREPP48147 710 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 TUBB4BP68371 445 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 KIF5AQ12840 1032 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 TUBB2AQ13885 445 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 ZNF658BQ4V348 819 aaPredicted RBP23.88■■□□□ 1.41
LIME1-206ENST00000487026 BPHLQ86WA6 291 aaPredicted RBP23.88■■□□□ 1.41
LIME1-206ENST00000487026 SYCE1Q8N0S2 351 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 ACVR1CQ8NER5 493 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 SLC35B2Q8TB61 432 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 ZNF501Q96CX3 271 aaPredicted RBP23.88■■□□□ 1.41
LIME1-206ENST00000487026 TUBB2BQ9BVA1 445 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 TLR10Q9BXR5 811 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 OR52A5Q9H2C5 316 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 SRMSQ9H3Y6 488 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 ACTL8Q9H568 366 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 POLHQ9Y253 713 aa23.88■■□□□ 1.41
LIME1-206ENST00000487026 K7EM74 188 aa23.87■■□□□ 1.41
LIME1-206ENST00000487026 SCRG1O75711 98 aa23.87■■□□□ 1.41
LIME1-206ENST00000487026 CDH3P22223 829 aa23.87■■□□□ 1.41
LIME1-206ENST00000487026 RPS18P62269 152 aaKnown RBP23.87■■□□□ 1.41
LIME1-206ENST00000487026 PRKAA1Q13131 559 aa23.87■■□□□ 1.41
LIME1-206ENST00000487026 LACTB2Q53H82 288 aaPredicted RBP23.87■■□□□ 1.41
LIME1-206ENST00000487026 TMTC4Q5T4D3 741 aa23.87■■□□□ 1.41
LIME1-206ENST00000487026 PRAMEF17Q5VTA0 474 aa23.87■■□□□ 1.41
LIME1-206ENST00000487026 TMEM126BQ8IUX1 230 aa23.87■■□□□ 1.41
LIME1-206ENST00000487026 SLC38A9Q8NBW4 561 aa23.87■■□□□ 1.41
LIME1-206ENST00000487026 TP53TG5Q9Y2B4 290 aa23.87■■□□□ 1.41
LIME1-206ENST00000487026 GSAPA4D1B5 854 aa23.86■■□□□ 1.41
LIME1-206ENST00000487026 H7C0S8 307 aa23.86■■□□□ 1.41
LIME1-206ENST00000487026 BTN3A3O00478 584 aa23.86■■□□□ 1.41
LIME1-206ENST00000487026 ZNF189O75820 626 aaPredicted RBP23.86■■□□□ 1.41
LIME1-206ENST00000487026 AP2A1O95782 977 aa23.86■■□□□ 1.41
LIME1-206ENST00000487026 PRKG2Q13237 762 aa23.86■■□□□ 1.41
LIME1-206ENST00000487026 DBN1Q16643 649 aa23.86■■□□□ 1.41
LIME1-206ENST00000487026 CCDC38Q502W7 563 aa23.86■■□□□ 1.41
LIME1-206ENST00000487026 ATG4AQ8WYN0 398 aa23.86■■□□□ 1.41
LIME1-206ENST00000487026 XKR8Q9H6D3 395 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms