RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 NUP85Q9BW27 656 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 ZFYVE1Q9HBF4 777 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 FAM60AQ9NP50 221 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 ABI3Q9P2A4 366 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 SERTAD3Q9UJW9 196 aa14.69□□□□□ -0.06
U2AF1-211ENST00000486519 GPR89AB7ZAQ6 455 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 CDK14O94921 469 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 SLC4A1P02730 911 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 C8BP07358 591 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 PIRTP0C851 137 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 GPR89BP0CG08 455 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 FOSL1P15407 271 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 AMPD1P23109 780 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 MMP11P24347 488 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 CTSCP53634 463 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 ARG2P78540 354 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 TMPRSS15P98073 1019 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 NIPAL4Q0D2K0 466 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 RALGPS1Q5JS13 557 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 PPP1R15BQ5SWA1 713 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 MARC1Q5VT66 337 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 TRAPPC5Q8IUR0 188 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 NDUFAF2Q8N183 169 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 OR4E2Q8NGC2 313 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 NAT14Q8WUY8 206 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 CNPY3Q9BT09 278 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 C1GALT1Q9NS00 363 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 ADAM22Q9P0K1 906 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 CDC23Q9UJX2 597 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 ZNF835Q9Y2P0 537 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 STAB1Q9NY15 2570 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 NBEAL1Q6ZS30 2694 aa14.68□□□□□ -0.06
U2AF1-211ENST00000486519 F8VZ95 297 aa14.67□□□□□ -0.06
U2AF1-211ENST00000486519 GFPT2O94808 682 aa14.67□□□□□ -0.06
U2AF1-211ENST00000486519 MSL3P1P0C860 447 aa14.67□□□□□ -0.06
U2AF1-211ENST00000486519 GABRA4P48169 554 aa14.67□□□□□ -0.06
U2AF1-211ENST00000486519 DCDP81605 110 aaKnown RBP14.67□□□□□ -0.06
U2AF1-211ENST00000486519 CDR2Q01850 454 aa14.67□□□□□ -0.06
U2AF1-211ENST00000486519 ITKQ08881 620 aa14.67□□□□□ -0.06
U2AF1-211ENST00000486519 KLHDC7AQ5VTJ3 777 aa14.67□□□□□ -0.06
U2AF1-211ENST00000486519 RHBDD2Q6NTF9 364 aa14.67□□□□□ -0.06
U2AF1-211ENST00000486519 ARMC6Q6NXE6 501 aa14.67□□□□□ -0.06
U2AF1-211ENST00000486519 TEX26Q8N6G2 289 aa14.67□□□□□ -0.06
U2AF1-211ENST00000486519 LRRN4Q8WUT4 740 aa14.67□□□□□ -0.06
U2AF1-211ENST00000486519 PSMF1Q92530 271 aa14.67□□□□□ -0.06
U2AF1-211ENST00000486519 LMF1Q96S06 567 aa14.67□□□□□ -0.06
U2AF1-211ENST00000486519 WWP1Q9H0M0 922 aa14.67□□□□□ -0.06
U2AF1-211ENST00000486519 DEF6Q9H4E7 631 aa14.67□□□□□ -0.06
U2AF1-211ENST00000486519 HRNRQ86YZ3 2850 aaPredicted RBP14.67□□□□□ -0.06
U2AF1-211ENST00000486519 GPR39O43194 453 aa14.66□□□□□ -0.06
U2AF1-211ENST00000486519 VEGFDO43915 354 aa14.66□□□□□ -0.06
U2AF1-211ENST00000486519 PBLDP30039 288 aaPredicted RBP14.66□□□□□ -0.06
U2AF1-211ENST00000486519 PRDX3P30048 256 aaKnown RBP14.66□□□□□ -0.06
U2AF1-211ENST00000486519 ZIC1Q15915 447 aa14.66□□□□□ -0.06
U2AF1-211ENST00000486519 INAQ16352 499 aa14.66□□□□□ -0.06
U2AF1-211ENST00000486519 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.66□□□□□ -0.06
U2AF1-211ENST00000486519 NKAIN1Q4KMZ8 207 aa14.66□□□□□ -0.06
U2AF1-211ENST00000486519 ANKRD20A8PQ5CZ79 823 aa14.66□□□□□ -0.06
U2AF1-211ENST00000486519 MON1BQ7L1V2 547 aa14.66□□□□□ -0.06
U2AF1-211ENST00000486519 BIVMQ86UB2 503 aa14.66□□□□□ -0.06
U2AF1-211ENST00000486519 RAVER1Q8IY67 606 aaKnown RBP14.66□□□□□ -0.06
U2AF1-211ENST00000486519 CARFQ8N187 725 aa14.66□□□□□ -0.06
U2AF1-211ENST00000486519 ZNF655Q8N720 491 aaPredicted RBP14.66□□□□□ -0.06
U2AF1-211ENST00000486519 WFDC11Q8NEX6 87 aa14.66□□□□□ -0.06
U2AF1-211ENST00000486519 ARRDC2Q8TBH0 407 aa14.66□□□□□ -0.06
U2AF1-211ENST00000486519 SDCCAG3Q96C92 435 aa14.66□□□□□ -0.06
U2AF1-211ENST00000486519 TSPAN10Q9H1Z9 355 aaPredicted RBP14.66□□□□□ -0.06
U2AF1-211ENST00000486519 PCDH9Q9HC56 1237 aa14.66□□□□□ -0.06
U2AF1-211ENST00000486519 SHOC2Q9UQ13 582 aa14.66□□□□□ -0.06
U2AF1-211ENST00000486519 LUC7L2Q9Y383 392 aaKnown RBP14.66□□□□□ -0.06
U2AF1-211ENST00000486519 TRAV17A0A0B4J275 112 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 GSAPA4D1B5 854 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 BTN3A3O00478 584 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 ADAM10O14672 748 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 POP7O75817 140 aaKnown RBP14.65□□□□□ -0.06
U2AF1-211ENST00000486519 HLA-DPA1P20036 260 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 SOX11P35716 441 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 CASP6P55212 293 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 RBPJQ06330 500 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 XRCC4Q13426 336 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 ERMARDQ5T6L9 678 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 IRAK1BP1Q5VVH5 260 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 SMYD5Q6GMV2 418 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 DNAJC24Q6P3W2 148 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 Q6ZPB1 254 aaPredicted RBP14.65□□□□□ -0.06
U2AF1-211ENST00000486519 COX15Q7KZN9 410 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 TRIM73Q86UV7 250 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 ATPAF2Q8N5M1 289 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 TRAM1L1Q8N609 369 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 LRRN4CLQ8ND94 238 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 OR11G2Q8NGC1 345 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 DNAJB8Q8NHS0 232 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.65□□□□□ -0.06
U2AF1-211ENST00000486519 C12orf66Q96MD2 445 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 SPSB2Q99619 263 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 PITPNM3Q9BZ71 974 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 TRIM7Q9C029 511 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 KIR3DX1Q9H7L2 352 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 ZNF358Q9NW07 568 aa14.65□□□□□ -0.06
U2AF1-211ENST00000486519 PTGFRNQ9P2B2 879 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms