RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SMG1Q96Q15 3661 aaKnown RBP17.22■□□□□ 0.35
COL6A1-204ENST00000486023 C17orf113A0A1B0GUU1 675 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 OR5K3A6NET4 321 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.21■□□□□ 0.35
COL6A1-204ENST00000486023 ANKRD34CP0C6C1 535 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 LIFP15018 202 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 ZNF28P17035 718 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 FOXN2P32314 431 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 NSG1P42857 185 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 BOP1Q14137 746 aaKnown RBP17.21■□□□□ 0.35
COL6A1-204ENST00000486023 SYTL3Q4VX76 610 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 DRICH1Q6PGQ1 229 aaPredicted RBP17.21■□□□□ 0.35
COL6A1-204ENST00000486023 AFTPHQ6ULP2 937 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 CERS6Q6ZMG9 384 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 TIPARPQ7Z3E1 657 aaKnown RBP17.21■□□□□ 0.35
COL6A1-204ENST00000486023 LDB1Q86U70 411 aaPredicted RBP17.21■□□□□ 0.35
COL6A1-204ENST00000486023 NLGN4XQ8N0W4 816 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 PRELID2Q8N945 189 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 NLGN4YQ8NFZ3 816 aaPredicted RBP17.21■□□□□ 0.35
COL6A1-204ENST00000486023 LCN9Q8WX39 176 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 EXTL1Q92935 676 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 RANBP9Q96S59 729 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 ZPBPQ9BS86 351 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 ULBP3Q9BZM4 244 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 KIR3DX1Q9H7L2 352 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 EPHA6Q9UF33 1036 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 HEBP2Q9Y5Z4 205 aa17.21■□□□□ 0.35
COL6A1-204ENST00000486023 GSAPA4D1B5 854 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 TOX3O15405 576 aaPredicted RBP17.2■□□□□ 0.34
COL6A1-204ENST00000486023 AP2A2O94973 939 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 OR56A5P0C7T3 313 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 PRKAA1Q13131 559 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 ITIH4Q14624 930 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 PCID2Q5JVF3 399 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 CES3Q6UWW8 571 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 NLRP9Q7RTR0 991 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 PRSS42Q7Z5A4 293 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 OTUD6BQ8N6M0 293 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 KLHL6Q8WZ60 621 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 TFGQ92734 400 aaPredicted RBP17.2■□□□□ 0.34
COL6A1-204ENST00000486023 MAGOHBQ96A72 148 aaKnown RBP17.2■□□□□ 0.34
COL6A1-204ENST00000486023 PPM1MQ96MI6 270 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 HGH1Q9BTY7 390 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 OR52A5Q9H2C5 316 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 SRMSQ9H3Y6 488 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 XKR8Q9H6D3 395 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 HOMER3Q9NSC5 361 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 SIDT1Q9NXL6 827 aaKnown RBP17.2■□□□□ 0.34
COL6A1-204ENST00000486023 BFARQ9NZS9 450 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 LNPEPQ9UIQ6 1025 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 JRKLQ9Y4A0 524 aa17.2■□□□□ 0.34
COL6A1-204ENST00000486023 ATRXP46100 2492 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 TCRBV7S3A2A0A539 114 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 KIAA0754O94854 1291 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 FTH1P02794 183 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 EBLN1P0CF75 366 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 FOLR1P15328 257 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 NELFEP18615 380 aaKnown RBP17.19■□□□□ 0.34
COL6A1-204ENST00000486023 MGAT1P26572 445 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 MAP4P27816 1152 aaKnown RBP17.19■□□□□ 0.34
COL6A1-204ENST00000486023 NDUFS1P28331 727 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 GPS1Q13098 491 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 SEMA3AQ14563 771 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 LYPLAL1Q5VWZ2 237 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 C4orf22Q6V702 233 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 SLC35F6Q8N357 371 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 GALNT6Q8NCL4 622 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 SNRNP27Q8WVK2 155 aaKnown RBP17.19■□□□□ 0.34
COL6A1-204ENST00000486023 ZFPM2Q8WW38 1151 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 UBXN4Q92575 508 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 TTC9Q92623 222 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 KIAA1143Q96AT1 154 aaPredicted RBP17.19■□□□□ 0.34
COL6A1-204ENST00000486023 RAB33BQ9H082 229 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 GPN2Q9H9Y4 310 aaPredicted RBP17.19■□□□□ 0.34
COL6A1-204ENST00000486023 SOHLH2Q9NX45 425 aa17.19■□□□□ 0.34
COL6A1-204ENST00000486023 TDRKHQ9Y2W6 561 aaKnown RBP17.19■□□□□ 0.34
COL6A1-204ENST00000486023 LOC101059948A0A1B0GTJ6 334 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 IQCF5A8MTL0 148 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 ZSCAN12O43309 604 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 SPAG6O75602 509 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 KRT14P02533 472 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 CDH3P22223 829 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 NMBRP28336 390 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 NPY2RP49146 381 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 C19orf57Q0VDD7 668 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 TUBB3Q13509 450 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 TTC27Q6P3X3 843 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 C6orf15Q6UXA7 325 aaPredicted RBP17.18■□□□□ 0.34
COL6A1-204ENST00000486023 ZNF534Q76KX8 674 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 PPP1R3BQ86XI6 285 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 ACVR1CQ8NER5 493 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 OR52E1Q8NGJ3 308 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 STAMBPL1Q96FJ0 436 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 PBKQ96KB5 322 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 KLHL25Q9H0H3 589 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 PDE7BQ9NP56 450 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 CATSPERZQ9NTU4 200 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 ASF1AQ9Y294 204 aa17.18■□□□□ 0.34
COL6A1-204ENST00000486023 TK2O00142 265 aa17.17■□□□□ 0.34
COL6A1-204ENST00000486023 QSOX1O00391 747 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms