RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 NDUFS2O75306 463 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 POP7O75817 140 aaKnown RBP11.1□□□□□ -0.63
SND1-212ENST00000485871 WNT1P04628 370 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 GSTM1P09488 218 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 CBSLP0DN79 551 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 TFEBP19484 476 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 CBSP35520 551 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 KCNC1P48547 511 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 IL2P60568 153 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 RPL6Q02878 288 aaKnown RBP11.1□□□□□ -0.63
SND1-212ENST00000485871 GSTM4Q03013 218 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 DMPKQ09013 629 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 GTF2H3Q13889 308 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 PCLAFQ15004 111 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 ACAP2Q15057 778 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 CCDC153Q494R4 210 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 PYCR3Q53H96 274 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 AGAP9Q5VTM2 703 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 DOK6Q6PKX4 331 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 CRTC3Q6UUV7 619 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 OTOAQ7RTW8 1153 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 LRRTM4Q86VH4 590 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 TRAPPC5Q8IUR0 188 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 NKAPQ8N5F7 415 aaKnown RBP11.1□□□□□ -0.63
SND1-212ENST00000485871 LILRA3Q8N6C8 439 aaPredicted RBP11.1□□□□□ -0.63
SND1-212ENST00000485871 OR13H1Q8NG92 308 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 OR2L2Q8NH16 312 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 OR1E3Q8WZA6 343 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 GLMNQ92990 594 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 KIAA1191Q96A73 305 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 LINGO1Q96FE5 620 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 HSPA12BQ96MM6 686 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 TSSK1BQ9BXA7 367 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 UNKQ9C0B0 810 aaKnown RBP11.1□□□□□ -0.63
SND1-212ENST00000485871 TFB2MQ9H5Q4 396 aaKnown RBP11.1□□□□□ -0.63
SND1-212ENST00000485871 NMRAL1Q9HBL8 299 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 DLL3Q9NYJ7 618 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 XPR1Q9UBH6 696 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 SLC23A2Q9UGH3 650 aa11.1□□□□□ -0.63
SND1-212ENST00000485871 TDRD6O60522 2096 aaKnown RBP11.09□□□□□ -0.63
SND1-212ENST00000485871 CCDC189A1A4V9 331 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 PRSS38A1L453 326 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 CDC7O00311 574 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 TNFRSF10CO14798 259 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 LIN7AO14910 233 aaPredicted RBP11.09□□□□□ -0.63
SND1-212ENST00000485871 KPNA5O15131 536 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 KMOO15229 486 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 GRID2O43424 1007 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 HNRNPCL1O60812 293 aaKnown RBP11.09□□□□□ -0.63
SND1-212ENST00000485871 DNAJC8O75937 253 aaPredicted RBP11.09□□□□□ -0.63
SND1-212ENST00000485871 MPC1LP0DKB6 136 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 NEFHP12036 1026 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 ENO3P13929 434 aaPredicted RBP11.09□□□□□ -0.63
SND1-212ENST00000485871 MTHFD2P13995 350 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 DGKAP23743 735 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 MAOBP27338 520 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 RABIFP47224 123 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 GLRBP48167 497 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 SERPINB4P48594 390 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 ATP6V0D1P61421 351 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 ARHGAP8P85298 464 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 CSTF1Q05048 431 aaKnown RBP11.09□□□□□ -0.63
SND1-212ENST00000485871 BOP1Q14137 746 aaKnown RBP11.09□□□□□ -0.63
SND1-212ENST00000485871 OR4D1Q15615 310 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 PPP1R3AQ16821 1122 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 ST3GAL2Q16842 350 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 RSPO4Q2I0M5 234 aaPredicted RBP11.09□□□□□ -0.63
SND1-212ENST00000485871 FAM83EQ2M2I3 478 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 TTLL9Q3SXZ7 439 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 PMS2CLQ68D20 193 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 ZC3H14Q6PJT7 736 aaKnown RBP11.09□□□□□ -0.63
SND1-212ENST00000485871 FAM83HQ6ZRV2 1179 aaPredicted RBP11.09□□□□□ -0.63
SND1-212ENST00000485871 Q6ZSR6 202 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 NEK10Q6ZWH5 1172 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 PIWIL4Q7Z3Z4 852 aaKnown RBP11.09□□□□□ -0.63
SND1-212ENST00000485871 MFSD2AQ8NA29 543 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 ARMC2Q8NEN0 867 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 OR56A4Q8NGH8 313 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 OR6Y1Q8NGX8 325 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 RHEBL1Q8TAI7 183 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 FAM174AQ8TBP5 190 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 HM13Q8TCT9 377 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 GAB3Q8WWW8 586 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 SREK1Q8WXA9 508 aaKnown RBP11.09□□□□□ -0.63
SND1-212ENST00000485871 ELMO1Q92556 727 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 PDXPQ96GD0 296 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 WDR92Q96MX6 357 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 MRPL57Q9BQC6 102 aaKnown RBP11.09□□□□□ -0.63
SND1-212ENST00000485871 SIKE1Q9BRV8 207 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 TIMM29Q9BSF4 260 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 TRIM55Q9BYV6 548 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 MRPL46Q9H2W6 279 aaKnown RBP11.09□□□□□ -0.63
SND1-212ENST00000485871 COG4Q9H9E3 785 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 MRPL40Q9NQ50 206 aaKnown RBP11.09□□□□□ -0.63
SND1-212ENST00000485871 TM7SF3Q9NS93 570 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 EIF2B4Q9UI10 523 aaKnown RBP11.09□□□□□ -0.63
SND1-212ENST00000485871 MID2Q9UJV3 735 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 SUFUQ9UMX1 484 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 SLC12A4Q9UP95 1085 aa11.09□□□□□ -0.63
SND1-212ENST00000485871 PRKAB1Q9Y478 270 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms