RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 NCAPGQ9BPX3 1015 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 TEX101Q9BY14 249 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 GPR87Q9BY21 358 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 MAGEH1Q9H213 219 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 AKIRIN1Q9H9L7 192 aaPredicted RBP6.49□□□□□ -1.37
SMC4-217ENST00000485867 SARS2Q9NP81 518 aaKnown RBP6.49□□□□□ -1.37
SMC4-217ENST00000485867 DTLQ9NZJ0 730 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 PPARGC1AQ9UBK2 798 aaKnown RBP6.49□□□□□ -1.37
SMC4-217ENST00000485867 USP25Q9UHP3 1055 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 HPCAL4Q9UM19 191 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 CNTN6Q9UQ52 1028 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 MTMR6Q9Y217 621 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 COPG1Q9Y678 874 aaKnown RBP6.49□□□□□ -1.37
SMC4-217ENST00000485867 PRRC2AP48634 2157 aaKnown RBP6.49□□□□□ -1.37
SMC4-217ENST00000485867 NCOA6Q14686 2063 aaPredicted RBP6.49□□□□□ -1.37
SMC4-217ENST00000485867 JMJD1CQ15652 2540 aa6.49□□□□□ -1.37
SMC4-217ENST00000485867 NUP210LQ5VU65 1888 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 A6NL46 340 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 RASA4BC9J798 803 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 MATN3O15232 486 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 SLC16A3O15427 465 aaKnown RBP6.48□□□□□ -1.37
SMC4-217ENST00000485867 RASA4O43374 803 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 THAP12O43422 761 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 BUB1O43683 1085 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 KDELR3O43731 214 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 RAMP2O60895 175 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 TMEM63AO94886 807 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 F9P00740 461 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 C9P02748 559 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 ERBB2P04626 1255 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 COX6B1P14854 86 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 CD1EP15812 388 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 POLD2P49005 469 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 FMO5P49326 533 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 RPS15P62841 145 aaKnown RBP6.48□□□□□ -1.37
SMC4-217ENST00000485867 CDK3Q00526 305 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 SLC6A3Q01959 620 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 GCNT1Q02742 428 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 LSAMPQ13449 338 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 CFAP58Q5T655 872 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 VWA5B1Q5TIE3 1220 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 AFMIDQ63HM1 303 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 STEAP3Q658P3 488 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 FAM199XQ6PEV8 388 aaPredicted RBP6.48□□□□□ -1.37
SMC4-217ENST00000485867 FJX1Q86VR8 437 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 NLRP14Q86W24 1093 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 KCNMB4Q86W47 210 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 CAMK1DQ8IU85 385 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 PLXDC1Q8IUK5 500 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 NXPE1Q8N323 547 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 WDTC1Q8N5D0 677 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 ITLN2Q8WWU7 325 aaPredicted RBP6.48□□□□□ -1.37
SMC4-217ENST00000485867 ZNF606Q8WXB4 792 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 CASKIN2Q8WXE0 1202 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 MBD6Q96DN6 1003 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 NUS1Q96E22 293 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 ZNF641Q96N77 438 aaPredicted RBP6.48□□□□□ -1.37
SMC4-217ENST00000485867 TBCBQ99426 244 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 YIPF4Q9BSR8 244 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 TBC1D10AQ9BXI6 508 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 KLC2Q9H0B6 622 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 ILKAPQ9H0C8 392 aaPredicted RBP6.48□□□□□ -1.37
SMC4-217ENST00000485867 EPB41L1Q9H4G0 881 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 ACP6Q9NPH0 428 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 TMEM248Q9NWD8 314 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.48□□□□□ -1.37
SMC4-217ENST00000485867 C5AR2Q9P296 337 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 DNAI1Q9UI46 699 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 STAP1Q9ULZ2 295 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 NEU3Q9UQ49 428 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 SLC17A4Q9Y2C5 497 aa6.48□□□□□ -1.37
SMC4-217ENST00000485867 A0A1B0GUH1 482 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 LILRA5A6NI73 299 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 F5H423 210 aaPredicted RBP6.47□□□□□ -1.37
SMC4-217ENST00000485867 PMM2O15305 246 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 FAM155BO75949 473 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 MYL1P05976 194 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 STSP08842 583 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 KRT5P13647 590 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 CAPN3P20807 821 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 SSTR2P30874 369 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 CUL4AQ13619 759 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 RAPSNQ13702 412 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 GRM3Q14832 879 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 ACOX1Q15067 660 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 ZNF630Q2M218 657 aaPredicted RBP6.47□□□□□ -1.37
SMC4-217ENST00000485867 SMTNL2Q2TAL5 461 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 SLC25A52Q3SY17 297 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 PTPN20Q4JDL3 420 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 INO80DQ53TQ3 878 aaPredicted RBP6.47□□□□□ -1.37
SMC4-217ENST00000485867 SLC35F1Q5T1Q4 408 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 LYPLAL1Q5VWZ2 237 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 DOK6Q6PKX4 331 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 TEPPQ6URK8 271 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 DPPA4Q7L190 304 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 PPP1R3BQ86XI6 285 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 DNAAF5Q86Y56 855 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 PASD1Q8IV76 773 aa6.47□□□□□ -1.37
SMC4-217ENST00000485867 CBARPQ8N350 705 aaPredicted RBP6.47□□□□□ -1.37
SMC4-217ENST00000485867 SH3KBP1Q96B97 665 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms