RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 PKP3Q9Y446 797 aa12.67□□□□□ -0.38
HDAC6-227ENST00000485102 HEBP2Q9Y5Z4 205 aa12.67□□□□□ -0.38
HDAC6-227ENST00000485102 DIDO1Q9BTC0 2240 aaKnown RBP12.66□□□□□ -0.38
HDAC6-227ENST00000485102 OR6C74A6NCV1 312 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 RNF224P0DH78 156 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 MSH3P20585 1137 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 HADHAP40939 763 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 CHRNA4P43681 627 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 TNNT3P45378 269 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-227ENST00000485102 ITGA1P56199 1179 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 ADCY2Q08462 1091 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 ABRQ12979 859 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 PRKAA1Q13131 559 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 MPP3Q13368 585 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 TFDP2Q14188 446 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 NOMO1Q15155 1222 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 TCEAL1Q15170 157 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 FNBP1LQ5T0N5 605 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 SLC6A19Q695T7 634 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 LCN10Q6JVE6 187 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 IGFL3Q6UXB1 125 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 GLT6D1Q7Z4J2 308 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 RFX6Q8HWS3 928 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 TMTC1Q8IUR5 882 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 RHOT2Q8IXI1 618 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 ZBTB2Q8N680 514 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 SPDYE1Q8NFV5 336 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-227ENST00000485102 OXNAD1Q96HP4 312 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-227ENST00000485102 CALR3Q96L12 384 aaKnown RBP12.66□□□□□ -0.38
HDAC6-227ENST00000485102 C12orf66Q96MD2 445 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 CCM2Q9BSQ5 444 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 DHRS4Q9BTZ2 278 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 NUDT9Q9BW91 350 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 PITPNM3Q9BZ71 974 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 GPR83Q9NYM4 423 aa12.66□□□□□ -0.38
HDAC6-227ENST00000485102 CFAP20Q9Y6A4 193 aaKnown RBP12.66□□□□□ -0.38
HDAC6-227ENST00000485102 FER1L5A0AVI2 2057 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 MDC1Q14676 2089 aaKnown RBP12.65□□□□□ -0.38
HDAC6-227ENST00000485102 C17orf113A0A1B0GUU1 675 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 SLC9B1P1A6NJY1 282 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 STX7O15400 261 aaKnown RBP12.65□□□□□ -0.38
HDAC6-227ENST00000485102 GPR39O43194 453 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 SGTAO43765 313 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 HBQ1P09105 142 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 SLC35G4P0C7Q5 338 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 NFKB1P19838 968 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 CYLC1P35663 651 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-227ENST00000485102 CDKN2BP42772 138 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 EIF2S3LQ2VIR3 472 aaKnown RBP12.65□□□□□ -0.38
HDAC6-227ENST00000485102 ZNF385CQ66K41 422 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-227ENST00000485102 FAM198BQ6UWH4 519 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 MFSD7Q6UXD7 560 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 MAMDC2Q7Z304 686 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-227ENST00000485102 SYTL1Q8IYJ3 562 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 ACVR1CQ8NER5 493 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 BLOC1S5Q8TDH9 187 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 RNF25Q96BH1 459 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-227ENST00000485102 PPM1MQ96MI6 270 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 BARD1Q99728 777 aaKnown RBP12.65□□□□□ -0.38
HDAC6-227ENST00000485102 CHRNA10Q9GZZ6 450 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 ACTR5Q9H9F9 607 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-227ENST00000485102 SOHLH2Q9NX45 425 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 SERTAD3Q9UJW9 196 aa12.65□□□□□ -0.38
HDAC6-227ENST00000485102 CELSR2Q9HCU4 2923 aa12.65□□□□□ -0.39
HDAC6-227ENST00000485102 CCDC88CQ9P219 2028 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 C5orf60A6NFR6 353 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 ENO4A6NNW6 628 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 ZNF185O15231 689 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 AKR1B10O60218 316 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 KLHL41O60662 606 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 CBX6O95503 412 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 PRAMEF1O95521 474 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 LDLRP01130 860 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 KRT1P04264 644 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 CD63P08962 238 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 POLR2CP19387 275 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-227ENST00000485102 CDH3P22223 829 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 PRDX3P30048 256 aaKnown RBP12.64□□□□□ -0.39
HDAC6-227ENST00000485102 AKT1P31749 480 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 PREPP48147 710 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 CD151P48509 253 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 MRPL49Q13405 166 aaKnown RBP12.64□□□□□ -0.39
HDAC6-227ENST00000485102 NCF4Q15080 339 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 TAF1AQ15573 450 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-227ENST00000485102 ODF2Q5BJF6 829 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 VWA5B1Q5TIE3 1220 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 PRAMEF17Q5VTA0 474 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 DUS1LQ6P1R4 473 aaKnown RBP12.64□□□□□ -0.39
HDAC6-227ENST00000485102 RANBP10Q6VN20 620 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 B4GALNT4Q76KP1 1039 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 PID1Q7Z2X4 250 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 RAB43Q86YS6 212 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 ZNF567Q8N184 647 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 SLC25A41Q8N5S1 370 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 OR4E2Q8NGC2 313 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 OR1L3Q8NH93 324 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 HM13Q8TCT9 377 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 HEXDCQ8WVB3 486 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 CLIP3Q96DZ5 547 aa12.64□□□□□ -0.39
HDAC6-227ENST00000485102 RMDN2Q96LZ7 410 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms