RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 ZNF248Q8NDW4 579 aa18.68■□□□□ 0.58
SNX17-206ENST00000484886 TRIM31Q9BZY9 425 aa18.68■□□□□ 0.58
SNX17-206ENST00000484886 OR52A5Q9H2C5 316 aa18.68■□□□□ 0.58
SNX17-206ENST00000484886 ANKRD11Q6UB99 2663 aaPredicted RBP18.67■□□□□ 0.58
SNX17-206ENST00000484886 EFCAB7A8K855 629 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 CDRT15L2A8MXV6 281 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 CCL4P13236 92 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 ARNTP27540 789 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 SLC5A2P31639 672 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 EIF2S3P41091 472 aaKnown RBP18.67■□□□□ 0.58
SNX17-206ENST00000484886 THOC5Q13769 683 aaKnown RBP18.67■□□□□ 0.58
SNX17-206ENST00000484886 ANKRD20A4Q4UJ75 823 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 ZNF658BQ4V348 819 aaPredicted RBP18.67■□□□□ 0.58
SNX17-206ENST00000484886 TMEM164Q5U3C3 297 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 ARMC6Q6NXE6 501 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 PDZD3Q86UT5 571 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 HOOK3Q86VS8 718 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 HNRNPLLQ8WVV9 542 aaKnown RBP18.67■□□□□ 0.58
SNX17-206ENST00000484886 KCNE4Q8WWG9 221 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 USP7Q93009 1102 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 STAMBPL1Q96FJ0 436 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 ZDHHC12Q96GR4 267 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 C16orf45Q96MC5 204 aaPredicted RBP18.67■□□□□ 0.58
SNX17-206ENST00000484886 KIR3DX1Q9H7L2 352 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 IL1RAPL1Q9NZN1 696 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 PDP2Q9P2J9 529 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 SLC24A2Q9UI40 661 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 GNPTGQ9UJJ9 305 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 URB1O60287 2271 aaKnown RBP18.67■□□□□ 0.58
SNX17-206ENST00000484886 MN1Q10571 1320 aaPredicted RBP18.67■□□□□ 0.58
SNX17-206ENST00000484886 FREM2Q5SZK8 3169 aa18.67■□□□□ 0.58
SNX17-206ENST00000484886 IQCF5A8MTL0 148 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 PRAMEF10O60809 474 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 MAGEA3P43357 314 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 LEPRP48357 1165 aaKnown RBP18.66■□□□□ 0.58
SNX17-206ENST00000484886 CD151P48509 253 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 TMED2Q15363 201 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 RNF187Q5TA31 235 aaPredicted RBP18.66■□□□□ 0.58
SNX17-206ENST00000484886 ZNF470Q6ECI4 717 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 NEPROQ6NW34 567 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 C19orf48Q6RUI8 117 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 FAM92BQ6ZTR7 304 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 CLEC14AQ86T13 490 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 KRT222Q8N1A0 295 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 PHC3Q8NDX5 983 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 ZFPM2Q8WW38 1151 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 LCN9Q8WX39 176 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 TFGQ92734 400 aaPredicted RBP18.66■□□□□ 0.58
SNX17-206ENST00000484886 ART4Q93070 314 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 SNF8Q96H20 258 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 FCRL3Q96P31 734 aaPredicted RBP18.66■□□□□ 0.58
SNX17-206ENST00000484886 HGH1Q9BTY7 390 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.66■□□□□ 0.58
SNX17-206ENST00000484886 CACNA1BQ00975 2339 aa18.66■□□□□ 0.58
SNX17-206ENST00000484886 WDFY3Q8IZQ1 3526 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 APOA4P06727 396 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 OGNP20774 298 aaKnown RBP18.65■□□□□ 0.58
SNX17-206ENST00000484886 FMO4P31512 558 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 ABCG1P45844 678 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 ARCN1P48444 511 aaKnown RBP18.65■□□□□ 0.58
SNX17-206ENST00000484886 SEPHS1P49903 392 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 PLOD1Q02809 727 aaPredicted RBP18.65■□□□□ 0.58
SNX17-206ENST00000484886 HSPA14Q0VDF9 509 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 PRKG2Q13237 762 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 MORF4L2Q15014 288 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 LONRF1Q17RB8 773 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 BBS9Q3SYG4 887 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 CACHD1Q5VU97 1274 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 ARHGAP22Q7Z5H3 698 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 OOSP2Q86WS3 158 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 LRRC6Q86X45 466 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 ACVR1CQ8NER5 493 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 OR4E2Q8NGC2 313 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 GSDMBQ8TAX9 411 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 LKAAEAR1Q8TD35 194 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 SIGLEC10Q96LC7 697 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 C9orf72Q96LT7 481 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 PANX3Q96QZ0 392 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 TCF12Q99081 682 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 CARD6Q9BX69 1037 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 MVB12BQ9H7P6 319 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 C20orf96Q9NUD7 363 aaPredicted RBP18.65■□□□□ 0.58
SNX17-206ENST00000484886 HRASLS2Q9NWW9 162 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 OCIAD1Q9NX40 245 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 SLC39A1Q9NY26 324 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 ASF1AQ9Y294 204 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 PCDHGA7Q9Y5G6 932 aa18.65■□□□□ 0.58
SNX17-206ENST00000484886 A0A087WV48 116 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 SLC5A10A0PJK1 596 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 OR6C74A6NCV1 312 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 EFCAB8A8MWE9 144 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 BANF1O75531 89 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 USP1O94782 785 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 C9P02748 559 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 FGF3P11487 239 aaPredicted RBP18.64■□□□□ 0.57
SNX17-206ENST00000484886 PGAM1P18669 254 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 RPS3P23396 243 aaKnown RBP eCLIP18.64■□□□□ 0.578e-11■■■□□ 17.3
SNX17-206ENST00000484886 CCR7P32248 378 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 ITGA8P53708 1063 aa18.64■□□□□ 0.57
SNX17-206ENST00000484886 MRPS25P82663 173 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms