RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 CD151P48509 253 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 CD97P48960 835 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 CERS6Q6ZMG9 384 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 TMTC1Q8IUR5 882 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 CFAP206Q8IYR0 622 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 ACVR1CQ8NER5 493 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 OR13C4Q8NGS5 318 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 COPS8Q99627 209 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 C1GALT1Q9NS00 363 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 ZDHHC3Q9NYG2 299 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 TLK1Q9UKI8 766 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 POMT2Q9UKY4 750 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 FARSAQ9Y285 508 aaKnown RBP11.16□□□□□ -0.62
SCFD1-206ENST00000484733 MAN2B2Q9Y2E5 1009 aa11.16□□□□□ -0.62
SCFD1-206ENST00000484733 CFAP20Q9Y6A4 193 aaKnown RBP11.16□□□□□ -0.62
SCFD1-206ENST00000484733 TLN1Q9Y490 2541 aaKnown RBP11.16□□□□□ -0.62
SCFD1-206ENST00000484733 RCCD1A6NED2 376 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 LDB2O43679 373 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 RAB40ALP0C0E4 278 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 GSDMDP57764 484 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 RPS15P62841 145 aaKnown RBP11.15□□□□□ -0.62
SCFD1-206ENST00000484733 RPA4Q13156 261 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 PARP6Q2NL67 630 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 IZUMO3Q5VZ72 239 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 KCTD11Q693B1 232 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 DUS1LQ6P1R4 473 aaKnown RBP11.15□□□□□ -0.62
SCFD1-206ENST00000484733 APOL2Q9BQE5 337 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 OR52A5Q9H2C5 316 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 ACTL8Q9H568 366 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 TFB2MQ9H5Q4 396 aaKnown RBP11.15□□□□□ -0.62
SCFD1-206ENST00000484733 UBR5O95071 2799 aaPredicted RBP11.15□□□□□ -0.62
SCFD1-206ENST00000484733 SCRG1O75711 98 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 NTRK1P04629 796 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 POLBP06746 335 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 PRKAA1Q13131 559 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 OLIG2Q13516 323 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 TMEM135Q86UB9 458 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 LRRC57Q8N9N7 239 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 TTC13Q8NBP0 860 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 SPDYE1Q8NFV5 336 aaPredicted RBP11.15□□□□□ -0.62
SCFD1-206ENST00000484733 CCDC110Q8TBZ0 833 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 MIB2Q96AX9 1013 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 RNF31Q96EP0 1072 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 MVB12BQ9H7P6 319 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 COG4Q9H9E3 785 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 VPS37BQ9H9H4 285 aa11.15□□□□□ -0.62
SCFD1-206ENST00000484733 AKIRIN1Q9H9L7 192 aaPredicted RBP11.15□□□□□ -0.62
SCFD1-206ENST00000484733 NLE1Q9NVX2 485 aaPredicted RBP11.15□□□□□ -0.62
SCFD1-206ENST00000484733 FLNBO75369 2602 aaKnown RBP11.15□□□□□ -0.62
SCFD1-206ENST00000484733 K7EM74 188 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 PSMD3O43242 534 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 AP2A2O94973 939 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 UBAP2LQ14157 1087 aaKnown RBP11.14□□□□□ -0.63
SCFD1-206ENST00000484733 KRT33BQ14525 404 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 GSE1Q14687 1217 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 GPR19Q15760 415 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 ASB18Q6ZVZ8 466 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 TMEM126BQ8IUX1 230 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 LILRA3Q8N6C8 439 aaPredicted RBP11.14□□□□□ -0.63
SCFD1-206ENST00000484733 FANCEQ9HB96 536 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 REXO2Q9Y3B8 237 aaKnown RBP11.14□□□□□ -0.63
SCFD1-206ENST00000484733 CYSRT1A8MQ03 144 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 POLR2CP19387 275 aaPredicted RBP11.14□□□□□ -0.63
SCFD1-206ENST00000484733 ACRV1P26436 265 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 MC4RP32245 332 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 SRSF1Q07955 248 aaKnown RBP eCLIP11.14□□□□□ -0.63
SCFD1-206ENST00000484733 GPS2Q13227 327 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 IGFBP7Q16270 282 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 PLEKHS1Q5SXH7 462 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 ZNF449Q6P9G9 518 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 FAM199XQ6PEV8 388 aaPredicted RBP11.14□□□□□ -0.63
SCFD1-206ENST00000484733 DSELQ8IZU8 1212 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 TEX19Q8NA77 164 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 OR4E2Q8NGC2 313 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 STYXQ8WUJ0 223 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 LCN9Q8WX39 176 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 CPT1BQ92523 772 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 ALG3Q92685 438 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 MRFAP1L1Q96HT8 127 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 FERD3LQ96RJ6 166 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 RUFY1Q96T51 708 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 PITPNM3Q9BZ71 974 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 SRMSQ9H3Y6 488 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 FAM96AQ9H5X1 160 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 MLXIPLQ9NP71 852 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 PCDHGA9Q9Y5G4 932 aaKnown RBP11.14□□□□□ -0.63
SCFD1-206ENST00000484733 DUSP10Q9Y6W6 482 aa11.14□□□□□ -0.63
SCFD1-206ENST00000484733 SOWAHDA6NJG2 315 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 SLC9B1P1A6NJY1 282 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 IFRD1O00458 451 aaPredicted RBP11.13□□□□□ -0.63
SCFD1-206ENST00000484733 IPO7O95373 1038 aaKnown RBP11.13□□□□□ -0.63
SCFD1-206ENST00000484733 KLK3P07288 261 aaPredicted RBP11.13□□□□□ -0.63
SCFD1-206ENST00000484733 CDH3P22223 829 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 RORAP35398 523 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 TMPRSS15P98073 1019 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 BOP1Q14137 746 aaKnown RBP11.13□□□□□ -0.63
SCFD1-206ENST00000484733 PAPD7Q5XG87 772 aaKnown RBP11.13□□□□□ -0.63
SCFD1-206ENST00000484733 MR1Q95460 341 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 LRRC40Q9H9A6 602 aa11.13□□□□□ -0.63
SCFD1-206ENST00000484733 ANKMY1Q9P2S6 941 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms