RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 AP2A2O94973 939 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 CD82P27701 267 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 RAB15P59190 212 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 KCNJ11Q14654 390 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 SYTL3Q4VX76 610 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 FBXO38Q6PIJ6 1188 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 PACS1Q6VY07 963 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 CERS6Q6ZMG9 384 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 NLRP9Q7RTR0 991 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 PRSS42Q7Z5A4 293 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 DTX1Q86Y01 620 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 OTUD6BQ8N6M0 293 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 OR4E2Q8NGC2 313 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 LKAAEAR1Q8TD35 194 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 ZDHHC12Q96GR4 267 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 PDLIM2Q96JY6 352 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 PPM1MQ96MI6 270 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 MAP3K3Q99759 626 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 TRIM56Q9BRZ2 755 aaKnown RBP11.97□□□□□ -0.49
MSH5-216ENST00000484309 HGH1Q9BTY7 390 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 ASPSCR1Q9BZE9 553 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 ZNF768Q9H5H4 540 aaKnown RBP11.97□□□□□ -0.49
MSH5-216ENST00000484309 KIR3DX1Q9H7L2 352 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 CATSPERZQ9NTU4 200 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 HRASLS2Q9NWW9 162 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 BFARQ9NZS9 450 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 RIMKLBQ9ULI2 386 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 PYCARDQ9ULZ3 195 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 SSUH2Q9Y2M2 353 aa11.97□□□□□ -0.49
MSH5-216ENST00000484309 IGHV5-51A0A0C4DH38 117 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 IQCF5A8MTL0 148 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 GOLGA8KD6RF30 607 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 GOLGA8TH3BQL2 631 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 GOLGA8MH3BSY2 632 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 K7ENP7 123 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 IFRD1O00458 451 aaPredicted RBP11.96□□□□□ -0.49
MSH5-216ENST00000484309 POLR1CO15160 346 aaPredicted RBP11.96□□□□□ -0.49
MSH5-216ENST00000484309 CD3EAPO15446 510 aaKnown RBP11.96□□□□□ -0.49
MSH5-216ENST00000484309 RAD1O60671 282 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 PHF2O75151 1096 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 FTH1P02794 183 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 OR56A5P0C7T3 313 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 POLR2CP19387 275 aaPredicted RBP11.96□□□□□ -0.49
MSH5-216ENST00000484309 WT1P19544 449 aaPredicted RBP11.96□□□□□ -0.49
MSH5-216ENST00000484309 NPY2RP49146 381 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 PRKG2Q13237 762 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 KCNAB1Q14722 419 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 DNTTIP2Q5QJE6 756 aaKnown RBP11.96□□□□□ -0.49
MSH5-216ENST00000484309 ARMC6Q6NXE6 501 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 LRRC8BQ6P9F7 803 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 ZNF449Q6P9G9 518 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 KLHL35Q6PF15 583 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 INO80CQ6PI98 192 aaPredicted RBP11.96□□□□□ -0.49
MSH5-216ENST00000484309 CEACAM20Q6UY09 585 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 OOSP2Q86WS3 158 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 KRT222Q8N1A0 295 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 MPP5Q8N3R9 675 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 IL22RA1Q8N6P7 574 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 CPT1BQ92523 772 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 NKD1Q969G9 470 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 MFSD3Q96ES6 412 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 CAPZA3Q96KX2 299 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 OR6C1Q96RD1 312 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 UBL7Q96S82 380 aaPredicted RBP11.96□□□□□ -0.49
MSH5-216ENST00000484309 NAP1L3Q99457 506 aaPredicted RBP11.96□□□□□ -0.49
MSH5-216ENST00000484309 B3GNT4Q9C0J1 378 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 IL22Q9GZX6 179 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 XKR8Q9H6D3 395 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 FBXO8Q9NRD0 319 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 TREX1Q9NSU2 369 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 EPHA6Q9UF33 1036 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 ANAPC5Q9UJX4 755 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 SNX12Q9UMY4 172 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 HEBP2Q9Y5Z4 205 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 COLEC10Q9Y6Z7 277 aa11.96□□□□□ -0.49
MSH5-216ENST00000484309 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.95□□□□□ -0.5
MSH5-216ENST00000484309 UBA6A0AVT1 1052 aaPredicted RBP11.95□□□□□ -0.5
MSH5-216ENST00000484309 GSAPA4D1B5 854 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.95□□□□□ -0.5
MSH5-216ENST00000484309 LIN7AO14910 233 aaPredicted RBP11.95□□□□□ -0.5
MSH5-216ENST00000484309 STK17BO94768 372 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 PRB1P04280 392 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 F7P08709 466 aaPredicted RBP11.95□□□□□ -0.5
MSH5-216ENST00000484309 EBLN1P0CF75 366 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 ZNF28P17035 718 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 NDUFS1P28331 727 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 ATP1A2P50993 1020 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 KPNA2P52292 529 aaKnown RBP11.95□□□□□ -0.5
MSH5-216ENST00000484309 CYP4F2P78329 520 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 CYP1B1Q16678 543 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 LYPLAL1Q5VWZ2 237 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 CASC4Q6P4E1 433 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 TIPARPQ7Z3E1 657 aaKnown RBP11.95□□□□□ -0.5
MSH5-216ENST00000484309 CAND1Q86VP6 1230 aaKnown RBP11.95□□□□□ -0.5
MSH5-216ENST00000484309 RASGRP3Q8IV61 690 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 CACNA2D3Q8IZS8 1091 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 SIDT2Q8NBJ9 832 aaKnown RBP11.95□□□□□ -0.5
MSH5-216ENST00000484309 ACVR1CQ8NER5 493 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 OR52E1Q8NGJ3 308 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 OR5AR1Q8NGP9 310 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms