RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 SLC24A2Q9UI40 661 aa17.57■□□□□ 0.4
HDAC6-225ENST00000483506 COLEC10Q9Y6Z7 277 aa17.57■□□□□ 0.4
HDAC6-225ENST00000483506 TTI1O43156 1089 aa17.56■□□□□ 0.4
HDAC6-225ENST00000483506 JMJD7P0C870 316 aa17.56■□□□□ 0.4
HDAC6-225ENST00000483506 AMD1P17707 334 aa17.56■□□□□ 0.4
HDAC6-225ENST00000483506 MPSTP25325 297 aa17.56■□□□□ 0.4
HDAC6-225ENST00000483506 ACADLP28330 430 aa17.56■□□□□ 0.4
HDAC6-225ENST00000483506 PREPP48147 710 aa17.56■□□□□ 0.4
HDAC6-225ENST00000483506 KLHL35Q6PF15 583 aa17.56■□□□□ 0.4
HDAC6-225ENST00000483506 ZNF572Q7Z3I7 529 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-225ENST00000483506 SPATA4Q8NEY3 305 aa17.56■□□□□ 0.4
HDAC6-225ENST00000483506 ELMO1Q92556 727 aa17.56■□□□□ 0.4
HDAC6-225ENST00000483506 LPGAT1Q92604 370 aa17.56■□□□□ 0.4
HDAC6-225ENST00000483506 ZNF669Q96BR6 464 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-225ENST00000483506 C9orf72Q96LT7 481 aa17.56■□□□□ 0.4
HDAC6-225ENST00000483506 TSSK1BQ9BXA7 367 aa17.56■□□□□ 0.4
HDAC6-225ENST00000483506 ZMYND15Q9H091 742 aa17.56■□□□□ 0.4
HDAC6-225ENST00000483506 MVB12BQ9H7P6 319 aa17.56■□□□□ 0.4
HDAC6-225ENST00000483506 PISDQ9UG56 409 aa17.56■□□□□ 0.4
HDAC6-225ENST00000483506 RPS6KL1Q9Y6S9 549 aa17.56■□□□□ 0.4
HDAC6-225ENST00000483506 AHCTF1Q8WYP5 2266 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 ITPR1Q14643 2758 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 B4E171 279 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 IFRD1O00458 451 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-225ENST00000483506 TP73O15350 636 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 NVLO15381 856 aaKnown RBP17.55■□□□□ 0.4
HDAC6-225ENST00000483506 TYRP1P17643 537 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 ITIH1P19827 911 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 CCR7P32248 378 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 CSTF2P33240 577 aaKnown RBP eCLIP17.55■□□□□ 0.4
HDAC6-225ENST00000483506 ETV5P41161 510 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 TSPAN7P41732 249 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 GFERP55789 205 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 BOP1Q14137 746 aaKnown RBP17.55■□□□□ 0.4
HDAC6-225ENST00000483506 DNAJC21Q5F1R6 531 aaKnown RBP17.55■□□□□ 0.4
HDAC6-225ENST00000483506 HIBCHQ6NVY1 386 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-225ENST00000483506 NEPROQ6NW34 567 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 FOXR1Q6PIV2 292 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 PRSS42Q7Z5A4 293 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 SDCCAG8Q86SQ7 713 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-225ENST00000483506 CILP2Q8IUL8 1156 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 BMPERQ8N8U9 685 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 ZNF248Q8NDW4 579 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 ACVR1CQ8NER5 493 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 LKAAEAR1Q8TD35 194 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 STAMBPL1Q96FJ0 436 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 BIRC8Q96P09 236 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 KRT12Q99456 494 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 TRIM51Q9BSJ1 452 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 SEMA5BQ9P283 1151 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 GNPTGQ9UJJ9 305 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 CDYLQ9Y232 598 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 PCDHGA3Q9Y5H0 932 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 CFAP47Q6ZTR5 3102 aa17.55■□□□□ 0.4
HDAC6-225ENST00000483506 OR5K3A6NET4 321 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 BHMG1C9JSJ3 638 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-225ENST00000483506 GOLGA8KD6RF30 607 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 GOLGA8TH3BQL2 631 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 PFDN6O15212 129 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 CAPN5O15484 640 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-225ENST00000483506 GPC4O75487 556 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 NDUFS3O75489 264 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 SEC31AO94979 1220 aaKnown RBP17.54■□□□□ 0.4
HDAC6-225ENST00000483506 FGF3P11487 239 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-225ENST00000483506 PGAM1P18669 254 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 PPM1FP49593 454 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-225ENST00000483506 CBLBQ13191 982 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 PLCL1Q15111 1095 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 CENPUQ71F23 418 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 LMNTD2Q8IXW0 634 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 SLC22A15Q8IZD6 547 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 TFGQ92734 400 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-225ENST00000483506 SNF8Q96H20 258 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 PANX3Q96QZ0 392 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 NAT9Q9BTE0 207 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 TFB2MQ9H5Q4 396 aaKnown RBP17.54■□□□□ 0.4
HDAC6-225ENST00000483506 VPS9D1Q9Y2B5 631 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 MAD1L1Q9Y6D9 718 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 FAM169AQ9Y6X4 670 aa17.54■□□□□ 0.4
HDAC6-225ENST00000483506 FAM187AA6NFU0 413 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 SLCO2B1O94956 709 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 TTC4O95801 387 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 ESR1P03372 595 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 CCL4P13236 92 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 AOAHP28039 575 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 SLC5A2P31639 672 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 LEPRP48357 1165 aaKnown RBP17.53■□□□□ 0.4
HDAC6-225ENST00000483506 DHX9Q08211 1270 aaKnown RBP17.53■□□□□ 0.4
HDAC6-225ENST00000483506 LONRF1Q17RB8 773 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 MSS51Q4VC12 460 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 SYTL3Q4VX76 610 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 CTSL3PQ5NE16 218 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 OTUD6BQ8N6M0 293 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 ASZ1Q8WWH4 475 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 ZDHHC12Q96GR4 267 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 CD180Q99467 661 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 EBNA1BP2Q99848 306 aaKnown RBP17.53■□□□□ 0.4
HDAC6-225ENST00000483506 DDA1Q9BW61 102 aa17.53■□□□□ 0.4
HDAC6-225ENST00000483506 ZNF768Q9H5H4 540 aaKnown RBP17.53■□□□□ 0.4
HDAC6-225ENST00000483506 INTS10Q9NVR2 710 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms