RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 CHD8Q9HCK8 2581 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 ZFC3H1O60293 1989 aaKnown RBP20.43■□□□□ 0.86
SEC13-217ENST00000482647 FRYQ5TBA9 3013 aa20.43■□□□□ 0.86
SEC13-217ENST00000482647 SLC5A10A0PJK1 596 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 KPNA5O15131 536 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 UBXN7O94888 489 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 APOA4P06727 396 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 ERVK-10P10266 1014 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 AMD1P17707 334 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 PLTPP55058 493 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 SLC7A5Q01650 507 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 HSPA14Q0VDF9 509 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 TMED2Q15363 201 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 TMEM71Q6P5X7 295 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 UNQ6494/PRO21346Q6UXR6 183 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 NAPRTQ6XQN6 538 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 PDZD3Q86UT5 571 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 ANKMY2Q8IV38 441 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 SLITRK4Q8IW52 837 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 DENND6AQ8IWF6 608 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 UNC5BQ8IZJ1 945 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 KRT222Q8N1A0 295 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 CEP112Q8N8E3 955 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 NCSTNQ92542 709 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 NXPE2Q96DL1 559 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 PPANQ9NQ55 473 aaKnown RBP20.42■□□□□ 0.86
SEC13-217ENST00000482647 FBXO5Q9UKT4 447 aa20.42■□□□□ 0.86
SEC13-217ENST00000482647 PTPRBP23467 1997 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 EIF3HO15372 352 aaKnown RBP eCLIP20.41■□□□□ 0.86
SEC13-217ENST00000482647 PROS1P07225 676 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 HOXB3P14651 431 aaPredicted RBP20.41■□□□□ 0.86
SEC13-217ENST00000482647 AOAHP28039 575 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 SLC1A2P43004 574 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 CFHR1Q03591 330 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 PLCL1Q15111 1095 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 CTSL3PQ5NE16 218 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 PHF19Q5T6S3 580 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 STEAP4Q687X5 459 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 DUS1LQ6P1R4 473 aaKnown RBP20.41■□□□□ 0.86
SEC13-217ENST00000482647 ZNF574Q6ZN55 896 aaPredicted RBP20.41■□□□□ 0.86
SEC13-217ENST00000482647 OTOAQ7RTW8 1153 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 TMPRSS9Q7Z410 1059 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 ZBED8Q8IZ13 594 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 FBXO36Q8NEA4 188 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 GSDMBQ8TAX9 411 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 LKAAEAR1Q8TD35 194 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 TFGQ92734 400 aaPredicted RBP20.41■□□□□ 0.86
SEC13-217ENST00000482647 CERS2Q96G23 380 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 FERD3LQ96RJ6 166 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 WDR83Q9BRX9 315 aaKnown RBP20.41■□□□□ 0.86
SEC13-217ENST00000482647 TMEM121BQ9BXQ6 578 aaPredicted RBP20.41■□□□□ 0.86
SEC13-217ENST00000482647 SEMA6CQ9H3T2 930 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 MVB12BQ9H7P6 319 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 FBXO6Q9NRD1 293 aaPredicted RBP20.41■□□□□ 0.86
SEC13-217ENST00000482647 AK5Q9Y6K8 562 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 ASPMQ8IZT6 3477 aa20.41■□□□□ 0.86
SEC13-217ENST00000482647 FREM2Q5SZK8 3169 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 CCDC187A0A096LP49 1063 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 IGHV5-10-1A0A0J9YXX1 117 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 C1QTNF9BB2RNN3 333 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 BHMG1C9JSJ3 638 aaPredicted RBP20.4■□□□□ 0.86
SEC13-217ENST00000482647 GPC4O75487 556 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 C1QTNF9P0C862 333 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 PKMP14618 531 aaKnown RBP20.4■□□□□ 0.86
SEC13-217ENST00000482647 TYRP1P17643 537 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 CHRM3P20309 590 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 CSF2RBP32927 897 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 LIMK2P53671 638 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 CSE1LP55060 971 aaKnown RBP20.4■□□□□ 0.86
SEC13-217ENST00000482647 EIF3IQ13347 325 aaKnown RBP20.4■□□□□ 0.86
SEC13-217ENST00000482647 FRG1Q14331 258 aaKnown RBP20.4■□□□□ 0.86
SEC13-217ENST00000482647 RTP5Q14D33 572 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 GLE1Q53GS7 698 aaKnown RBP20.4■□□□□ 0.86
SEC13-217ENST00000482647 ZNF789Q5FWF6 425 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 KLHL35Q6PF15 583 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 PLXDC1Q8IUK5 500 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 SLC22A15Q8IZD6 547 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 NOA1Q8NC60 698 aaKnown RBP20.4■□□□□ 0.86
SEC13-217ENST00000482647 WDR36Q8NI36 951 aaKnown RBP20.4■□□□□ 0.86
SEC13-217ENST00000482647 PYROXD1Q8WU10 500 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 LIN37Q96GY3 246 aaPredicted RBP20.4■□□□□ 0.86
SEC13-217ENST00000482647 CCDC68Q9H2F9 335 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 KIR3DX1Q9H7L2 352 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 PLAC1Q9HBJ0 212 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 AKAP7Q9P0M2 348 aaPredicted RBP20.4■□□□□ 0.86
SEC13-217ENST00000482647 SLC24A2Q9UI40 661 aa20.4■□□□□ 0.86
SEC13-217ENST00000482647 SLCO2B1O94956 709 aa20.39■□□□□ 0.85
SEC13-217ENST00000482647 ACADLP28330 430 aa20.39■□□□□ 0.85
SEC13-217ENST00000482647 LSSP48449 732 aa20.39■□□□□ 0.85
SEC13-217ENST00000482647 GUCY2DQ02846 1103 aa20.39■□□□□ 0.85
SEC13-217ENST00000482647 TRA2AQ13595 282 aaKnown RBP eCLIP20.39■□□□□ 0.85
SEC13-217ENST00000482647 TRADDQ15628 312 aa20.39■□□□□ 0.85
SEC13-217ENST00000482647 KIAA0408Q6ZU52 694 aa20.39■□□□□ 0.85
SEC13-217ENST00000482647 CNTN4Q8IWV2 1026 aa20.39■□□□□ 0.85
SEC13-217ENST00000482647 PALM2Q8IXS6 379 aa20.39■□□□□ 0.85
SEC13-217ENST00000482647 LSMEM2Q8N112 164 aa20.39■□□□□ 0.85
SEC13-217ENST00000482647 C2CD4AQ8NCU7 369 aaPredicted RBP20.39■□□□□ 0.85
SEC13-217ENST00000482647 PHC3Q8NDX5 983 aa20.39■□□□□ 0.85
SEC13-217ENST00000482647 ACVR1CQ8NER5 493 aa20.39■□□□□ 0.85
SEC13-217ENST00000482647 FBXO25Q8TCJ0 367 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms