RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 TFB2MQ9H5Q4 396 aaKnown RBP12.52□□□□□ -0.41
VPS52-218ENST00000482399 POU2F3Q9UKI9 436 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 SARDHQ9UL12 918 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 SAMHD1Q9Y3Z3 626 aaKnown RBP12.52□□□□□ -0.41
VPS52-218ENST00000482399 CPQQ9Y646 472 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 F5H5T6 163 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 SNPHO15079 494 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 MSH3P20585 1137 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 ERVPABLB-1P60509 514 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 RPS24P62847 133 aaKnown RBP12.52□□□□□ -0.41
VPS52-218ENST00000482399 TRAF3Q13114 568 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 AQP6Q13520 282 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 ABRAXAS2Q15018 415 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 TRIM60Q495X7 471 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 ARID2Q68CP9 1835 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 GPR153Q6NV75 609 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 SPRED1Q7Z699 444 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 PLEKHH3Q7Z736 793 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 PIANPQ8IYJ0 282 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 TTC9BQ8N6N2 239 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 OR52J3Q8NH60 311 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 KIAA1191Q96A73 305 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 FUBP1Q96AE4 644 aaKnown RBP12.52□□□□□ -0.41
VPS52-218ENST00000482399 UHRF1Q96T88 793 aaPredicted RBP12.52□□□□□ -0.41
VPS52-218ENST00000482399 RBM4BQ9BQ04 359 aaKnown RBP12.52□□□□□ -0.41
VPS52-218ENST00000482399 RBM4Q9BWF3 364 aaKnown RBP12.52□□□□□ -0.41
VPS52-218ENST00000482399 CLPBQ9H078 707 aa12.52□□□□□ -0.41
VPS52-218ENST00000482399 PDP1Q9P0J1 537 aaPredicted RBP12.52□□□□□ -0.41
VPS52-218ENST00000482399 ZNF831Q5JPB2 1677 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 A8MV72 311 aaPredicted RBP12.51□□□□□ -0.41
VPS52-218ENST00000482399 EVPLLA8MZ36 301 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 FAM155AB1AL88 458 aaPredicted RBP12.51□□□□□ -0.41
VPS52-218ENST00000482399 FGF1P05230 155 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 ENO2P09104 434 aaPredicted RBP12.51□□□□□ -0.41
VPS52-218ENST00000482399 FDXRP22570 491 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 CCL14Q16627 93 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 MS4A13Q5J8X5 152 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 C1QTNF12Q5T7M4 302 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 GPC2Q8N158 579 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 NKAPQ8N5F7 415 aaKnown RBP12.51□□□□□ -0.41
VPS52-218ENST00000482399 BRSK1Q8TDC3 778 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 UBE2FQ969M7 185 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 REXO5Q96IC2 774 aaKnown RBP12.51□□□□□ -0.41
VPS52-218ENST00000482399 ZNF347Q96SE7 839 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 ATOH8Q96SQ7 321 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 MAGEE1Q9HCI5 957 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 TMEM9Q9P0T7 183 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 DNAJB9Q9UBS3 223 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 ZNF490Q9ULM2 529 aaPredicted RBP12.51□□□□□ -0.41
VPS52-218ENST00000482399 TPRKBQ9Y3C4 175 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 SPO11Q9Y5K1 396 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 PPP2R3BQ9Y5P8 575 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 SLC1A7O00341 560 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 TFECO14948 347 aaPredicted RBP12.51□□□□□ -0.41
VPS52-218ENST00000482399 MUSKO15146 869 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 RAD51BO15315 384 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 UGT2B4P06133 528 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 CD36P16671 472 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 S100A3P33764 101 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 KCNQ1P51787 676 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 ADAM17P78536 824 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 TAF10Q12962 218 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 LEMD2Q8NC56 503 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 SPPL2AQ8TCT8 520 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 PYCR2Q96C36 320 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 BBS2Q9BXC9 721 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 WDR12Q9GZL7 423 aaKnown RBP12.51□□□□□ -0.41
VPS52-218ENST00000482399 ADARB2Q9NS39 739 aaKnown RBP12.51□□□□□ -0.41
VPS52-218ENST00000482399 WDR37Q9Y2I8 494 aa12.51□□□□□ -0.41
VPS52-218ENST00000482399 B3GALT4O96024 378 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 ALPLP05186 524 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 HLA-DPA1P20036 260 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 NR4A2P43354 598 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 ATP4BP51164 291 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 EPS8Q12929 822 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 ZNF792Q3KQV3 632 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 ARMC12Q5T9G4 340 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 MSANTD2Q6P1R3 559 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 MBOAT1Q6ZNC8 495 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 SCD5Q86SK9 330 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 RBM23Q86U06 439 aaKnown RBP12.5□□□□□ -0.41
VPS52-218ENST00000482399 C11orf74Q86VG3 221 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 ZDHHC21Q8IVQ6 265 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 SCML4Q8N228 414 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 CHDHQ8NE62 594 aaPredicted RBP12.5□□□□□ -0.41
VPS52-218ENST00000482399 ZFYVE19Q96K21 471 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 ZNF599Q96NL3 588 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 TRMT13Q9NUP7 481 aaKnown RBP12.5□□□□□ -0.41
VPS52-218ENST00000482399 ABCD2Q9UBJ2 740 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 OPTCQ9UBM4 332 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 ASNA1O43681 348 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 CHRM5P08912 532 aaPredicted RBP12.5□□□□□ -0.41
VPS52-218ENST00000482399 POU2F1P14859 743 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 RHOQP17081 205 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 CTU2Q2VPK5 515 aaKnown RBP12.5□□□□□ -0.41
VPS52-218ENST00000482399 CES5AQ6NT32 575 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 PIK3C3Q8NEB9 887 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 CHPT1Q8WUD6 406 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 EBPLQ9BY08 206 aa12.5□□□□□ -0.41
VPS52-218ENST00000482399 CIPCQ9C0C6 399 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms