RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 D2HGDHQ8N465 521 aa13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 SPDYE1Q8NFV5 336 aaPredicted RBP13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 OR4E2Q8NGC2 313 aa13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 C9orf43Q8TAL5 461 aaPredicted RBP13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 HM13Q8TCT9 377 aa13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 SEC14L1Q92503 715 aa13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 ABHD17AQ96GS6 310 aa13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 FERD3LQ96RJ6 166 aa13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 NRTNQ99748 197 aa13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 TRIM4Q9C037 500 aa13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 LRRC40Q9H9A6 602 aa13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 VPS37BQ9H9H4 285 aa13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 ZNF71Q9NQZ8 489 aaPredicted RBP13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 FGF21Q9NSA1 209 aa13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 KCND1Q9NSA2 647 aa13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 ZDHHC3Q9NYG2 299 aa13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 ANAPC2Q9UJX6 822 aa13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 PCDHGA6Q9Y5G7 932 aa13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 HELZ2Q9BYK8 2649 aaKnown RBP13.11□□□□□ -0.31
CTDSP1-208ENST00000482272 PIPSLA2A3N6 862 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 C21orf140B9A014 251 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 MATN2O00339 956 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 IFRD1O00458 451 aaPredicted RBP13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 MAP3K7O43318 606 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 CREG1O75629 220 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 METTL18O95568 372 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 ZBTB11O95625 1053 aaPredicted RBP13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 FTCDO95954 541 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 NTRK1P04629 796 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 EBLN1P0CF75 366 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 TPH1P17752 444 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 CDKN1CP49918 316 aaPredicted RBP13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 ZNF140P52738 457 aaPredicted RBP13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 TUBB4BP68371 445 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 KLF1Q13351 362 aaPredicted RBP13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 DNASE1L3Q13609 305 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 TUBB2AQ13885 445 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 KCNAB1Q14722 419 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 P3H1Q32P28 736 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 ATP1A1-AS1Q5TC04 95 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 KCTD11Q693B1 232 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 CERS6Q6ZMG9 384 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 FAM71DQ8N9W8 422 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 ACVR1CQ8NER5 493 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 OR8K5Q8NH50 307 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 TUBB2BQ9BVA1 445 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 GPR87Q9BY21 358 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 NLE1Q9NVX2 485 aaPredicted RBP13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 POLHQ9Y253 713 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 KCNMB2Q9Y691 235 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 CAPN6Q9Y6Q1 641 aa13.1□□□□□ -0.31
CTDSP1-208ENST00000482272 CDC14CA4D256 554 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 H7C0S8 307 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 TIAF1O95411 115 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 GSTM1P09488 218 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 POLR2CP19387 275 aaPredicted RBP13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 CDH3P22223 829 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 ACRV1P26436 265 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 CD151P48509 253 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 RPS15P62841 145 aaKnown RBP13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 GSTM4Q03013 218 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 TLE1Q04724 770 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 LINC00523Q86TU6 105 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 SERPINA9Q86WD7 417 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 TMEM126BQ8IUX1 230 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 CT55Q8WUE5 264 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 STYXQ8WUJ0 223 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 LCN9Q8WX39 176 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 CDKN2AIPNLQ96HQ2 116 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 DNAJC1Q96KC8 554 aaKnown RBP13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 RMDN2Q96LZ7 410 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 TWSG1Q9GZX9 223 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 SRMSQ9H3Y6 488 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 COG4Q9H9E3 785 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 C1GALT1Q9NS00 363 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 PIH1D1Q9NWS0 290 aaKnown RBP13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 SOHLH2Q9NX45 425 aa13.09□□□□□ -0.31
CTDSP1-208ENST00000482272 ASH1LQ9NR48 2969 aaKnown RBP13.08□□□□□ -0.31
CTDSP1-208ENST00000482272 IGLV3-16A0A075B6K0 115 aa13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 TRBV5-4A0A0C4DH59 114 aa13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 MKRN2OSH3BPM6 223 aa13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 CPNE3O75131 537 aaKnown RBP13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 SCRG1O75711 98 aa13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 AP2A2O94973 939 aa13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 KLK3P07288 261 aaPredicted RBP13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 STIP1P31948 543 aaKnown RBP13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 KPNA2P52292 529 aaKnown RBP13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 CACNG1Q06432 222 aa13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 RPA4Q13156 261 aa13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 SKIDA1Q1XH10 827 aa13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 ZNF658BQ4V348 819 aaPredicted RBP13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 LACTB2Q53H82 288 aaPredicted RBP13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 TAB3Q8N5C8 712 aaPredicted RBP13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 PPM1MQ96MI6 270 aa13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 TMEM121Q9BTD3 319 aa13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 MVB12BQ9H7P6 319 aa13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 FANCEQ9HB96 536 aa13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 SYTL2Q9HCH5 934 aa13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 BTRCQ9Y297 605 aa13.08□□□□□ -0.32
CTDSP1-208ENST00000482272 GSAPA4D1B5 854 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms