RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 SEPT11Q9NVA2 429 aaKnown RBP3.57□□□□□ -1.84
COPA-204ENST00000481522 UBA2Q9UBT2 640 aaPredicted RBP3.57□□□□□ -1.84
COPA-204ENST00000481522 STK39Q9UEW8 545 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 FBXW11Q9UKB1 542 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 KCNS2Q9ULS6 477 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 R3HDM2Q9Y2K5 976 aaKnown RBP3.57□□□□□ -1.84
COPA-204ENST00000481522 CABIN1Q9Y6J0 2220 aa3.57□□□□□ -1.84
COPA-204ENST00000481522 DOPEY2Q9Y3R5 2298 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 PRRC2BQ5JSZ5 2229 aaKnown RBP3.56□□□□□ -1.84
COPA-204ENST00000481522 C5P01031 1676 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 CASKIN1Q8WXD9 1431 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 KANSL1LA0AUZ9 987 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 ATP2A1O14983 1001 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 S1PR1P21453 382 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 MCM3P25205 808 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 GNL1P36915 607 aaPredicted RBP3.56□□□□□ -1.84
COPA-204ENST00000481522 BRWD1-AS2P59051 145 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 TAS2R38P59533 333 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 HILS1P60008 231 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 SIM2Q14190 667 aaPredicted RBP3.56□□□□□ -1.84
COPA-204ENST00000481522 MAPRE1Q15691 268 aaKnown RBP3.56□□□□□ -1.84
COPA-204ENST00000481522 MYLK3Q32MK0 819 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 PCGF3Q3KNV8 242 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 GPATCH4Q5T3I0 446 aaKnown RBP3.56□□□□□ -1.84
COPA-204ENST00000481522 IRAK1BP1Q5VVH5 260 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 ACSM2BQ68CK6 577 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 ZNF280DQ6N043 979 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 BRAT1Q6PJG6 821 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 C9orf139Q6ZV77 190 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 ZNF34Q8IZ26 560 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 BEST3Q8N1M1 668 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 MAB21L3Q8N8X9 362 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 OR1J2Q8NGS2 313 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 DUSP19Q8WTR2 217 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 DNAAF4Q8WXU2 420 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 CD101Q93033 1021 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 MOAP1Q96BY2 351 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 HES6Q96HZ4 224 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 QRFPRQ96P65 431 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 PKP4Q99569 1192 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 TREX2Q9BQ50 279 aaPredicted RBP3.56□□□□□ -1.84
COPA-204ENST00000481522 CHCHD6Q9BRQ6 235 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 MAGIXQ9H6Y5 334 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 FBXL2Q9UKC9 423 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 PADI1Q9ULC6 663 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 CLIC4Q9Y696 253 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 SESN1Q9Y6P5 492 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 TECTAO75443 2155 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 DOCK7Q96N67 2140 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 SCN5AQ14524 2016 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 COL6A5A8TX70 2615 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 LY75O60449 1722 aa3.56□□□□□ -1.84
COPA-204ENST00000481522 CDC42BPGQ6DT37 1551 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 CHD7Q9P2D1 2997 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 INSRP06213 1382 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 A8MZ25 164 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 H3BQ06 376 aaPredicted RBP3.55□□□□□ -1.84
COPA-204ENST00000481522 BMPR1BO00238 502 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 AP3D1O14617 1153 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 PTP4A3O75365 173 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 GPC4O75487 556 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 ACTN1P12814 892 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 KCNA5P22460 613 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 CORO1AP31146 461 aaKnown RBP3.55□□□□□ -1.84
COPA-204ENST00000481522 MAPK4P31152 587 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 UBA7P41226 1012 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 CDH8P55286 799 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 CDC16Q13042 620 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 PDE1CQ14123 709 aaPredicted RBP3.55□□□□□ -1.84
COPA-204ENST00000481522 ZNF805Q5CZA5 627 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 HYIQ5T013 277 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 LRIF1Q5T3J3 769 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 TRNP1Q6NT89 227 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 GDPD4Q6W3E5 623 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 SDCCAG8Q86SQ7 713 aaPredicted RBP3.55□□□□□ -1.84
COPA-204ENST00000481522 TMPRSS12Q86WS5 348 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 ODF3L1Q8IXM7 274 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 TTC39CQ8N584 583 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 WDTC1Q8N5D0 677 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 THAP6Q8TBB0 222 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 ABTB1Q969K4 478 aaPredicted RBP3.55□□□□□ -1.84
COPA-204ENST00000481522 CDCA5Q96FF9 252 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 ELMOD3Q96FG2 381 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 NODALQ96S42 347 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 FTOQ9C0B1 505 aaKnown RBP eCLIP3.55□□□□□ -1.84
COPA-204ENST00000481522 PIGMQ9H3S5 423 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 SYNCQ9H7C4 482 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 BLOC1S4Q9NUP1 217 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 SETD4Q9NVD3 440 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 COPG2Q9UBF2 871 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 POU2F3Q9UKI9 436 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 KLHL20Q9Y2M5 609 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 SPENQ96T58 3664 aaKnown RBP3.55□□□□□ -1.84
COPA-204ENST00000481522 RYR3Q15413 4870 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 CEP295Q9C0D2 2601 aa3.55□□□□□ -1.84
COPA-204ENST00000481522 LTBP2Q14767 1821 aa3.54□□□□□ -1.84
COPA-204ENST00000481522 PTPRCP08575 1304 aa3.54□□□□□ -1.84
COPA-204ENST00000481522 CGNL1Q0VF96 1302 aa3.54□□□□□ -1.84
COPA-204ENST00000481522 PDS5AQ29RF7 1337 aaKnown RBP3.54□□□□□ -1.84
COPA-204ENST00000481522 DMXL2Q8TDJ6 3036 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms