RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 B3GNT4Q9C0J1 378 aa12.55□□□□□ -0.4
ABCF3-215ENST00000481116 ZNF768Q9H5H4 540 aaKnown RBP12.55□□□□□ -0.4
ABCF3-215ENST00000481116 KIR3DX1Q9H7L2 352 aa12.55□□□□□ -0.4
ABCF3-215ENST00000481116 FBXO8Q9NRD0 319 aa12.55□□□□□ -0.4
ABCF3-215ENST00000481116 HRASLS2Q9NWW9 162 aa12.55□□□□□ -0.4
ABCF3-215ENST00000481116 SIDT1Q9NXL6 827 aaKnown RBP12.55□□□□□ -0.4
ABCF3-215ENST00000481116 MARCH4Q9P2E8 410 aaPredicted RBP12.55□□□□□ -0.4
ABCF3-215ENST00000481116 EPHA6Q9UF33 1036 aa12.55□□□□□ -0.4
ABCF3-215ENST00000481116 PCDHB11Q9Y5F2 797 aa12.55□□□□□ -0.4
ABCF3-215ENST00000481116 OR5K3A6NET4 321 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 IQCF5A8MTL0 148 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 PGRMC1O00264 195 aaKnown RBP12.54□□□□□ -0.4
ABCF3-215ENST00000481116 POLR1CO15160 346 aaPredicted RBP12.54□□□□□ -0.4
ABCF3-215ENST00000481116 KIF5CO60282 957 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 AP2A2O94973 939 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 PRB1P04280 392 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 SPTBP11277 2137 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 POLR2CP19387 275 aaPredicted RBP12.54□□□□□ -0.4
ABCF3-215ENST00000481116 TPSB2P20231 275 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 CD82P27701 267 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 RAB15P59190 212 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 PRKG2Q13237 762 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 BOP1Q14137 746 aaKnown RBP12.54□□□□□ -0.4
ABCF3-215ENST00000481116 KCNAB1Q14722 419 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 TPSAB1Q15661 275 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 LRRC8BQ6P9F7 803 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 CCDC137Q6PK04 289 aaKnown RBP12.54□□□□□ -0.4
ABCF3-215ENST00000481116 PCSK4Q6UW60 755 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 CEACAM20Q6UY09 585 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 PACS1Q6VY07 963 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 NLRP9Q7RTR0 991 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 TIPARPQ7Z3E1 657 aaKnown RBP12.54□□□□□ -0.4
ABCF3-215ENST00000481116 PRSS42Q7Z5A4 293 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 MPP5Q8N3R9 675 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 LKAAEAR1Q8TD35 194 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 MFSD3Q96ES6 412 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 PDLIM2Q96JY6 352 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 OR6C1Q96RD1 312 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 TRIM56Q9BRZ2 755 aaKnown RBP12.54□□□□□ -0.4
ABCF3-215ENST00000481116 ASPSCR1Q9BZE9 553 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 SPRY4Q9C004 299 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 RAB33BQ9H082 229 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 VPS37BQ9H9H4 285 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 TREX1Q9NSU2 369 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 CATSPERZQ9NTU4 200 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 BFARQ9NZS9 450 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 PYCARDQ9ULZ3 195 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 COLEC10Q9Y6Z7 277 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 ATMQ13315 3056 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 CACNA1GO43497 2377 aa12.54□□□□□ -0.4
ABCF3-215ENST00000481116 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.53□□□□□ -0.4
ABCF3-215ENST00000481116 GOLGA8KD6RF30 607 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 GOLGA8TH3BQL2 631 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 GOLGA8MH3BSY2 632 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 IFRD1O00458 451 aaPredicted RBP12.53□□□□□ -0.4
ABCF3-215ENST00000481116 CD3EAPO15446 510 aaKnown RBP12.53□□□□□ -0.4
ABCF3-215ENST00000481116 RAD1O60671 282 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 TMEM63AO94886 807 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 FTH1P02794 183 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 OR56A5P0C7T3 313 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 ZNF28P17035 718 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 KPNA2P52292 529 aaKnown RBP12.53□□□□□ -0.4
ABCF3-215ENST00000481116 CYP1B1Q16678 543 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 LYPLAL1Q5VWZ2 237 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 CAND1Q86VP6 1230 aaKnown RBP12.53□□□□□ -0.4
ABCF3-215ENST00000481116 OOSP2Q86WS3 158 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 CACNA2D3Q8IZS8 1091 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 KRT222Q8N1A0 295 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 OR5AR1Q8NGP9 310 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 ACTRT1Q8TDG2 376 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 KLHL6Q8WZ60 621 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 CPT1BQ92523 772 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 TFGQ92734 400 aaPredicted RBP12.53□□□□□ -0.4
ABCF3-215ENST00000481116 UBL7Q96S82 380 aaPredicted RBP12.53□□□□□ -0.4
ABCF3-215ENST00000481116 HGH1Q9BTY7 390 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 IL22Q9GZX6 179 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 XKR8Q9H6D3 395 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 ANAPC5Q9UJX4 755 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 PILRAQ9UKJ1 303 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 SNX12Q9UMY4 172 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 NEU2Q9Y3R4 380 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 HEBP2Q9Y5Z4 205 aa12.53□□□□□ -0.4
ABCF3-215ENST00000481116 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.52□□□□□ -0.41
ABCF3-215ENST00000481116 UBA6A0AVT1 1052 aaPredicted RBP12.52□□□□□ -0.41
ABCF3-215ENST00000481116 SLC5A10A0PJK1 596 aa12.52□□□□□ -0.41
ABCF3-215ENST00000481116 BHMG1C9JSJ3 638 aaPredicted RBP12.52□□□□□ -0.41
ABCF3-215ENST00000481116 BTN3A3O00478 584 aa12.52□□□□□ -0.41
ABCF3-215ENST00000481116 LIN7AO14910 233 aaPredicted RBP12.52□□□□□ -0.41
ABCF3-215ENST00000481116 TOX3O15405 576 aaPredicted RBP12.52□□□□□ -0.41
ABCF3-215ENST00000481116 PHF2O75151 1096 aa12.52□□□□□ -0.41
ABCF3-215ENST00000481116 STK17BO94768 372 aa12.52□□□□□ -0.41
ABCF3-215ENST00000481116 FOLR1P15328 257 aa12.52□□□□□ -0.41
ABCF3-215ENST00000481116 NELFEP18615 380 aaKnown RBP12.52□□□□□ -0.41
ABCF3-215ENST00000481116 ARNTP27540 789 aa12.52□□□□□ -0.41
ABCF3-215ENST00000481116 NDUFS1P28331 727 aa12.52□□□□□ -0.41
ABCF3-215ENST00000481116 CCR7P32248 378 aa12.52□□□□□ -0.41
ABCF3-215ENST00000481116 CD151P48509 253 aa12.52□□□□□ -0.41
ABCF3-215ENST00000481116 CYP4F2P78329 520 aa12.52□□□□□ -0.41
ABCF3-215ENST00000481116 RPA4Q13156 261 aa12.52□□□□□ -0.41
ABCF3-215ENST00000481116 DNTTIP2Q5QJE6 756 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms