RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 TAGAPQ8N103 731 aa4.76□□□□□ -1.65
CALD1-219ENST00000480638 MTERF3Q96E29 417 aa4.76□□□□□ -1.65
CALD1-219ENST00000480638 C16orf70Q9BSU1 422 aa4.76□□□□□ -1.65
CALD1-219ENST00000480638 DDX43Q9NXZ2 648 aaKnown RBP4.76□□□□□ -1.65
CALD1-219ENST00000480638 PSD3Q9NYI0 1048 aa4.76□□□□□ -1.65
CALD1-219ENST00000480638 KIAA1210Q9ULL0 1709 aa4.75□□□□□ -1.65
CALD1-219ENST00000480638 MED19A0JLT2 244 aaPredicted RBP4.75□□□□□ -1.65
CALD1-219ENST00000480638 SLC22A2O15244 555 aa4.75□□□□□ -1.65
CALD1-219ENST00000480638 CLIC2O15247 247 aa4.75□□□□□ -1.65
CALD1-219ENST00000480638 GAS8-AS1O95177 125 aa4.75□□□□□ -1.65
CALD1-219ENST00000480638 LIFP15018 202 aa4.75□□□□□ -1.65
CALD1-219ENST00000480638 CASP2P42575 452 aa4.75□□□□□ -1.65
CALD1-219ENST00000480638 NR0B1P51843 470 aaKnown RBP4.75□□□□□ -1.65
CALD1-219ENST00000480638 RPS18P62269 152 aaKnown RBP4.75□□□□□ -1.65
CALD1-219ENST00000480638 PCLAFQ15004 111 aa4.75□□□□□ -1.65
CALD1-219ENST00000480638 GRTP1Q5TC63 336 aa4.75□□□□□ -1.65
CALD1-219ENST00000480638 DHRS7BQ6IAN0 325 aaPredicted RBP4.75□□□□□ -1.65
CALD1-219ENST00000480638 ARHGAP11AQ6P4F7 1023 aa4.75□□□□□ -1.65
CALD1-219ENST00000480638 FOXP4Q8IVH2 680 aaPredicted RBP4.75□□□□□ -1.65
CALD1-219ENST00000480638 LINC00346Q8IVM7 164 aa4.75□□□□□ -1.65
CALD1-219ENST00000480638 TRIM58Q8NG06 486 aa4.75□□□□□ -1.65
CALD1-219ENST00000480638 LGALS12Q96DT0 336 aa4.75□□□□□ -1.65
CALD1-219ENST00000480638 OR6C1Q96RD1 312 aa4.75□□□□□ -1.65
CALD1-219ENST00000480638 RBM4Q9BWF3 364 aaKnown RBP4.75□□□□□ -1.65
CALD1-219ENST00000480638 TEX12Q9BXU0 123 aa4.75□□□□□ -1.65
CALD1-219ENST00000480638 PCDHGB4Q9UN71 923 aa4.75□□□□□ -1.65
CALD1-219ENST00000480638 LOC102723996A0A087X1L8 192 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 A0A0G2JLW4 131 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 OR6C76A6NM76 312 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 ADAMDEC1O15204 470 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 ENTPD3O75355 529 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 CSPG5O95196 566 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 ZWINTO95229 277 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 PRSS56P0CW18 603 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 ATP12AP54707 1039 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 PRKG2Q13237 762 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 NTRK2Q16620 822 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 CEP57Q86XR8 500 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 CPSF7Q8N684 471 aaKnown RBP4.74□□□□□ -1.65
CALD1-219ENST00000480638 PTPMT1Q8WUK0 201 aaPredicted RBP4.74□□□□□ -1.65
CALD1-219ENST00000480638 LITAFQ99732 161 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 RHNO1Q9BSD3 238 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 FSD1Q9BTV5 496 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 MOV10L1Q9BXT6 1211 aaKnown RBP4.74□□□□□ -1.65
CALD1-219ENST00000480638 COQ3Q9NZJ6 369 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 TMEM5Q9Y2B1 443 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 WBP11Q9Y2W2 641 aaKnown RBP4.74□□□□□ -1.65
CALD1-219ENST00000480638 C2CD2Q9Y426 696 aa4.74□□□□□ -1.65
CALD1-219ENST00000480638 MAGEB17A8MXT2 336 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 PRAMEF11O60813 436 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 SAT1P21673 171 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 ACTN2P35609 894 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 EIF2DP41214 584 aaKnown RBP4.73□□□□□ -1.65
CALD1-219ENST00000480638 STK4Q13043 487 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 RALBP1Q15311 655 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 CCDC6Q16204 474 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 C15orf59Q2T9L4 293 aaPredicted RBP4.73□□□□□ -1.65
CALD1-219ENST00000480638 TMEM30BQ3MIR4 351 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 IGSF11Q5DX21 431 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 FAM53AQ6NSI3 398 aaPredicted RBP4.73□□□□□ -1.65
CALD1-219ENST00000480638 LINGO4Q6UY18 593 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 C15orf39Q6ZRI6 1047 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 MFSD6Q6ZSS7 791 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 ISCA2Q86U28 154 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 ADIPOR2Q86V24 386 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 FBXO39Q8N4B4 442 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 OR2AJ1Q8NGZ0 328 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 TAS1R2Q8TE23 839 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 JAKMIP2Q96AA8 810 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 SLC22A18Q96BI1 424 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 SGK494Q96LW2 274 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 NEK1Q96PY6 1258 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 CDRT15Q96T59 188 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 CCDC68Q9H2F9 335 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 ACKR4Q9NPB9 350 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 GIMAP4Q9NUV9 329 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 OSER1Q9NX31 292 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 SLC7A7Q9UM01 511 aa4.73□□□□□ -1.65
CALD1-219ENST00000480638 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.73□□□□□ -1.65
CALD1-219ENST00000480638 SOS1Q07889 1333 aaPredicted RBP4.72□□□□□ -1.65
CALD1-219ENST00000480638 ZNF541Q9H0D2 1346 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 LOC100509620A0A075B734 347 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 HEPACAM2A8MVW5 462 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 AHCYL1O43865 530 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 APOHP02749 345 aaPredicted RBP4.72□□□□□ -1.65
CALD1-219ENST00000480638 CHRNB4P30926 498 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 STAT2P52630 851 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 GNB1P62873 340 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 CDK3Q00526 305 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 PPIGQ13427 754 aaKnown RBP eCLIP4.72□□□□□ -1.65
CALD1-219ENST00000480638 GRAPQ13588 217 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 CEP85LQ5SZL2 805 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 FIGLAQ6QHK4 219 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 ZNF843Q8N446 348 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 AFAP1Q8N556 730 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 WDSUB1Q8N9V3 476 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 ZBTB8BQ8NAP8 495 aaPredicted RBP4.72□□□□□ -1.65
CALD1-219ENST00000480638 PAPD5Q8NDF8 572 aaKnown RBP4.72□□□□□ -1.65
CALD1-219ENST00000480638 ZFAND2BQ8WV99 257 aa4.72□□□□□ -1.65
CALD1-219ENST00000480638 PRPF31Q8WWY3 499 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms