RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 NRIP1P48552 1158 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 MMP14P50281 582 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 CLCNKAP51800 687 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 PNLIPRP2P54317 469 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 EGR4Q05215 589 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 PCLAFQ15004 111 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 CTF1Q16619 201 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 DECR1Q16698 335 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 ZNF260Q3ZCT1 412 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 PARP10Q53GL7 1025 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 GPR139Q6DWJ6 353 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 FAM122CQ6P4D5 195 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 ZNF549Q6P9A3 640 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 KRBA2Q6ZNG9 492 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 SDCCAG8Q86SQ7 713 aaPredicted RBP4.92□□□□□ -1.62
RFC4-212ENST00000479307 FOXRED2Q8IWF2 684 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 LSMEM1Q8N8F7 131 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 OR1J2Q8NGS2 313 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 PRPF31Q8WWY3 499 aaKnown RBP4.92□□□□□ -1.62
RFC4-212ENST00000479307 ADAMTS14Q8WXS8 1223 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 WASF1Q92558 559 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 APBB2Q92870 758 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 TAAR8Q969N4 342 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 MTBPQ96DY7 904 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 ZBED3Q96IU2 234 aaPredicted RBP4.92□□□□□ -1.62
RFC4-212ENST00000479307 FIZ1Q96SL8 496 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 ANP32EQ9BTT0 268 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 DEFB129Q9H1M3 183 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 PIGMQ9H3S5 423 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 OSGEPL1Q9H4B0 414 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 C11orf49Q9H6J7 331 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 PCDH9Q9HC56 1237 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 PDE7BQ9NP56 450 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 MCM9Q9NXL9 1143 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 PSD3Q9NYI0 1048 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 MARCH4Q9P2E8 410 aaPredicted RBP4.92□□□□□ -1.62
RFC4-212ENST00000479307 MYO3BQ8WXR4 1341 aa4.92□□□□□ -1.62
RFC4-212ENST00000479307 CACNA1BQ00975 2339 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 TRANK1O15050 2925 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 CLEC18AA5D8T8 446 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 SOCS6O14544 535 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 PAPSS1O43252 624 aaPredicted RBP4.91□□□□□ -1.62
RFC4-212ENST00000479307 ICAM1P05362 532 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 PRSS2P07478 247 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 LMAN1P49257 510 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 PCYT1AP49585 367 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 RRP1P56182 461 aaKnown RBP4.91□□□□□ -1.62
RFC4-212ENST00000479307 IFI35P80217 286 aaPredicted RBP4.91□□□□□ -1.62
RFC4-212ENST00000479307 KCNC3Q14003 757 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 PLCB4Q15147 1175 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 KRT79Q5XKE5 535 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 AWAT2Q6E213 333 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 DUS1LQ6P1R4 473 aaKnown RBP4.91□□□□□ -1.62
RFC4-212ENST00000479307 KIF6Q6ZMV9 814 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 FJX1Q86VR8 437 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 SCYL3Q8IZE3 742 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 FBXL14Q8N1E6 418 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 BEST3Q8N1M1 668 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 CLIP4Q8N3C7 705 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 PCDH20Q8N6Y1 951 aaKnown RBP4.91□□□□□ -1.62
RFC4-212ENST00000479307 IL17RCQ8NAC3 791 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 CLEC18CQ8NCF0 446 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 DNAAF4Q8WXU2 420 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 SLC22A18Q96BI1 424 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 PHF21BQ96EK2 531 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 DACH2Q96NX9 599 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 SLF1Q9BQI6 1058 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 NTPCRQ9BSD7 190 aaKnown RBP4.91□□□□□ -1.62
RFC4-212ENST00000479307 KIFC3Q9BVG8 833 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 WSB2Q9NYS7 404 aaPredicted RBP4.91□□□□□ -1.62
RFC4-212ENST00000479307 NRBP1Q9UHY1 535 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 SPTBN4Q9H254 2564 aa4.91□□□□□ -1.62
RFC4-212ENST00000479307 IGLV5-52A0A0A0MRZ9 124 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 A0A1W2PR77 199 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 hDV102S1A0JD36 115 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 LINC01553A4QN01 128 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 EIF4E1BA6NMX2 242 aaKnown RBP4.9□□□□□ -1.63
RFC4-212ENST00000479307 H3BQ06 376 aaPredicted RBP4.9□□□□□ -1.63
RFC4-212ENST00000479307 HS3ST1O14792 307 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 PLOD3O60568 738 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 RFPL2O75678 378 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 SELLP14151 372 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 IL11P20809 199 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 MSH2P43246 934 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 HSD17B4P51659 736 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 POLGP54098 1239 aaPredicted RBP4.9□□□□□ -1.63
RFC4-212ENST00000479307 OASLQ15646 514 aaKnown RBP4.9□□□□□ -1.63
RFC4-212ENST00000479307 MYLK3Q32MK0 819 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 LCN10Q6JVE6 187 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 TMCO3Q6UWJ1 677 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 CLEC17AQ6ZS10 378 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 NRROSQ86YC3 692 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 CHERPQ8IWX8 916 aaKnown RBP4.9□□□□□ -1.63
RFC4-212ENST00000479307 THAP6Q8TBB0 222 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 HM13Q8TCT9 377 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 SCARB1Q8WTV0 552 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 MIB2Q96AX9 1013 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 ORAI1Q96D31 301 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 OR1F2PQ96R84 312 aa4.9□□□□□ -1.63
RFC4-212ENST00000479307 GAD1Q99259 594 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms