RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 C9orf72Q96LT7 481 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 WWP1Q9H0M0 922 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 ABCG4Q9H172 646 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 STN1Q9H668 368 aaKnown RBP26.2■■□□□ 1.78
CCM2-211ENST00000478582 UCK1Q9HA47 277 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 LATS2Q9NRM7 1088 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 POT1Q9NUX5 634 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 RABGEF1Q9UJ41 708 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 PSMD13Q9UNM6 376 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 COMMD10Q9Y6G5 202 aa26.2■■□□□ 1.78
CCM2-211ENST00000478582 ASXL3Q9C0F0 2248 aa26.19■■□□□ 1.78
CCM2-211ENST00000478582 KPNA5O15131 536 aa26.19■■□□□ 1.78
CCM2-211ENST00000478582 SLC35G4P0C7Q5 338 aa26.19■■□□□ 1.78
CCM2-211ENST00000478582 AOAHP28039 575 aa26.19■■□□□ 1.78
CCM2-211ENST00000478582 CD151P48509 253 aa26.19■■□□□ 1.78
CCM2-211ENST00000478582 GPX6P59796 221 aa26.19■■□□□ 1.78
CCM2-211ENST00000478582 TUBB4BP68371 445 aa26.19■■□□□ 1.78
CCM2-211ENST00000478582 MPP1Q00013 466 aa26.19■■□□□ 1.78
CCM2-211ENST00000478582 BIRC2Q13490 618 aa26.19■■□□□ 1.78
CCM2-211ENST00000478582 RPE65Q16518 533 aa26.19■■□□□ 1.78
CCM2-211ENST00000478582 CDCP2Q5VXM1 449 aa26.19■■□□□ 1.78
CCM2-211ENST00000478582 C3orf62Q6ZUJ4 267 aa26.19■■□□□ 1.78
CCM2-211ENST00000478582 WDR48Q8TAF3 677 aa26.19■■□□□ 1.78
CCM2-211ENST00000478582 INSM2Q96T92 566 aaPredicted RBP26.19■■□□□ 1.78
CCM2-211ENST00000478582 FMO2Q99518 471 aa26.19■■□□□ 1.78
CCM2-211ENST00000478582 PIKFYVEQ9Y2I7 2098 aa26.18■■□□□ 1.78
CCM2-211ENST00000478582 OR52A4PA6NMU1 304 aa26.18■■□□□ 1.78
CCM2-211ENST00000478582 GPC4O75487 556 aa26.18■■□□□ 1.78
CCM2-211ENST00000478582 AHSGP02765 367 aa26.18■■□□□ 1.78
CCM2-211ENST00000478582 ITGB6P18564 788 aa26.18■■□□□ 1.78
CCM2-211ENST00000478582 GABRB3P28472 473 aa26.18■■□□□ 1.78
CCM2-211ENST00000478582 PDHA2P29803 388 aa26.18■■□□□ 1.78
CCM2-211ENST00000478582 CNSTQ6PJW8 725 aa26.18■■□□□ 1.78
CCM2-211ENST00000478582 RBM12BQ8IXT5 1001 aaKnown RBP26.18■■□□□ 1.78
CCM2-211ENST00000478582 KRT222Q8N1A0 295 aa26.18■■□□□ 1.78
CCM2-211ENST00000478582 ASZ1Q8WWH4 475 aa26.18■■□□□ 1.78
CCM2-211ENST00000478582 RMDN2Q96LZ7 410 aa26.18■■□□□ 1.78
CCM2-211ENST00000478582 LDHAL6BQ9BYZ2 381 aaPredicted RBP26.18■■□□□ 1.78
CCM2-211ENST00000478582 NRSN2Q9GZP1 204 aa26.18■■□□□ 1.78
CCM2-211ENST00000478582 LRRC4CQ9HCJ2 640 aa26.18■■□□□ 1.78
CCM2-211ENST00000478582 ZFATQ9P243 1243 aa26.18■■□□□ 1.78
CCM2-211ENST00000478582 ZW10O43264 779 aa26.17■■□□□ 1.78
CCM2-211ENST00000478582 SPAG6O75602 509 aa26.17■■□□□ 1.78
CCM2-211ENST00000478582 VIPP01282 170 aa26.17■■□□□ 1.78
CCM2-211ENST00000478582 BOP1Q14137 746 aaKnown RBP26.17■■□□□ 1.78
CCM2-211ENST00000478582 TEX35Q5T0J7 233 aa26.17■■□□□ 1.78
CCM2-211ENST00000478582 ZNF549Q6P9A3 640 aa26.17■■□□□ 1.78
CCM2-211ENST00000478582 SPRED1Q7Z699 444 aa26.17■■□□□ 1.78
CCM2-211ENST00000478582 SLC26A11Q86WA9 606 aa26.17■■□□□ 1.78
CCM2-211ENST00000478582 TRIM48Q8IWZ4 208 aa26.17■■□□□ 1.78
CCM2-211ENST00000478582 EIF1ADQ8N9N8 165 aaKnown RBP26.17■■□□□ 1.78
CCM2-211ENST00000478582 SPDYE1Q8NFV5 336 aaPredicted RBP26.17■■□□□ 1.78
CCM2-211ENST00000478582 ZFPM2Q8WW38 1151 aa26.17■■□□□ 1.78
CCM2-211ENST00000478582 TMEM159Q96B96 161 aa26.17■■□□□ 1.78
CCM2-211ENST00000478582 CXorf40BQ96DE9 158 aa26.17■■□□□ 1.78
CCM2-211ENST00000478582 NXPE2Q96DL1 559 aa26.17■■□□□ 1.78
CCM2-211ENST00000478582 SLC40A1Q9NP59 571 aa26.17■■□□□ 1.78
CCM2-211ENST00000478582 CDYLQ9Y232 598 aa26.17■■□□□ 1.78
CCM2-211ENST00000478582 TCRBV9S1A1TA0A576 114 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 NTN3O00634 580 aaPredicted RBP26.16■■□□□ 1.78
CCM2-211ENST00000478582 B4GAT1O43505 415 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 NIPSNAP2O75323 286 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 SLCO2B1O94956 709 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 APOA4P06727 396 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 F7P08709 466 aaPredicted RBP26.16■■□□□ 1.78
CCM2-211ENST00000478582 MTHFD1P11586 935 aaKnown RBP26.16■■□□□ 1.78
CCM2-211ENST00000478582 PREPP48147 710 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 RTP5Q14D33 572 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 PLEKHS1Q5SXH7 462 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 CAPN12Q6ZSI9 719 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 PDZD3Q86UT5 571 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 KCNJ9Q92806 393 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 C12orf66Q96MD2 445 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 CCDC68Q9H2F9 335 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 NSMCE4AQ9NXX6 385 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 KLHL42Q9P2K6 505 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 NFU1Q9UMS0 254 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 HEBP2Q9Y5Z4 205 aa26.16■■□□□ 1.78
CCM2-211ENST00000478582 RP1P56715 2156 aa26.15■■□□□ 1.78
CCM2-211ENST00000478582 IFRD1O00458 451 aaPredicted RBP26.15■■□□□ 1.78
CCM2-211ENST00000478582 SLU7O95391 586 aaKnown RBP26.15■■□□□ 1.78
CCM2-211ENST00000478582 CHRM3P20309 590 aa26.15■■□□□ 1.78
CCM2-211ENST00000478582 SQSTM1Q13501 440 aa26.15■■□□□ 1.78
CCM2-211ENST00000478582 BRD3Q15059 726 aa26.15■■□□□ 1.78
CCM2-211ENST00000478582 TMED2Q15363 201 aa26.15■■□□□ 1.78
CCM2-211ENST00000478582 SYTL3Q4VX76 610 aa26.15■■□□□ 1.78
CCM2-211ENST00000478582 NAPRTQ6XQN6 538 aa26.15■■□□□ 1.78
CCM2-211ENST00000478582 TMEM26Q6ZUK4 368 aa26.15■■□□□ 1.78
CCM2-211ENST00000478582 SLC22A15Q8IZD6 547 aa26.15■■□□□ 1.78
CCM2-211ENST00000478582 DEPDC7Q96QD5 511 aa26.15■■□□□ 1.78
CCM2-211ENST00000478582 SLC38A3Q99624 504 aa26.15■■□□□ 1.78
CCM2-211ENST00000478582 AARSD1Q9BTE6 412 aaKnown RBP26.15■■□□□ 1.78
CCM2-211ENST00000478582 LRRN3Q9H3W5 708 aa26.15■■□□□ 1.78
CCM2-211ENST00000478582 SLC17A6Q9P2U8 582 aa26.15■■□□□ 1.78
CCM2-211ENST00000478582 CORO1CQ9ULV4 474 aaPredicted RBP26.15■■□□□ 1.78
CCM2-211ENST00000478582 MED16Q9Y2X0 877 aa26.15■■□□□ 1.78
CCM2-211ENST00000478582 LILRA5A6NI73 299 aa26.14■■□□□ 1.78
CCM2-211ENST00000478582 FAM159BA6NKW6 160 aa26.14■■□□□ 1.78
CCM2-211ENST00000478582 C1QAP02745 245 aa26.14■■□□□ 1.78
CCM2-211ENST00000478582 ACADLP28330 430 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms