RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 TUBB2AQ13885 445 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 GPR18Q14330 331 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 ISXQ2M1V0 245 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 SPANXN3Q5MJ09 141 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 RNF187Q5TA31 235 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-222ENST00000478095 TRMT10BQ6PF06 316 aaKnown RBP10.04□□□□□ -0.8
HDAC6-222ENST00000478095 ZDHHC24Q6UX98 284 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 CCNI2Q6ZMN8 369 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-222ENST00000478095 TMEM26Q6ZUK4 368 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 CCDC25Q86WR0 208 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 ZBED8Q8IZ13 594 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 MMGT1Q8N4V1 131 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 FBXO25Q8TCJ0 367 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 ART4Q93070 314 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 SH3KBP1Q96B97 665 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 ATXN7L3BQ96GX2 97 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 AHCYL2Q96HN2 611 aaKnown RBP10.04□□□□□ -0.8
HDAC6-222ENST00000478095 FAM167BQ9BTA0 163 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 NAT9Q9BTE0 207 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 TUBB2BQ9BVA1 445 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 CARD6Q9BX69 1037 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 OR52A5Q9H2C5 316 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 SAYSD1Q9NPB0 183 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 PPANQ9NQ55 473 aaKnown RBP10.04□□□□□ -0.8
HDAC6-222ENST00000478095 TMEM9Q9P0T7 183 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 ACSL5Q9ULC5 683 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 TEX264Q9Y6I9 313 aa10.04□□□□□ -0.8
HDAC6-222ENST00000478095 ZNF106Q9H2Y7 1883 aaKnown RBP10.04□□□□□ -0.8
HDAC6-222ENST00000478095 SLC5A10A0PJK1 596 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 PMS2P1A4D2B8 440 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 C1QTNF9BB2RNN3 333 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 E7ESA3 106 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 IFRD1O00458 451 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-222ENST00000478095 LIN7AO14910 233 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-222ENST00000478095 PFDN6O15212 129 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 DUX1O43812 170 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 TTC4O95801 387 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 S1PR4O95977 384 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 C1QTNF9P0C862 333 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 TYRP1P17643 537 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 RPS3P23396 243 aaKnown RBP eCLIP10.03□□□□□ -0.8
HDAC6-222ENST00000478095 ABCG1P45844 678 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 CARSP49589 748 aaKnown RBP10.03□□□□□ -0.8
HDAC6-222ENST00000478095 CFHR1Q03591 330 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 KRT33BQ14525 404 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 PLCL1Q15111 1095 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 STEAP4Q687X5 459 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 CAPRIN2Q6IMN6 1127 aaKnown RBP10.03□□□□□ -0.8
HDAC6-222ENST00000478095 LRRC6Q86X45 466 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 VRK3Q8IV63 474 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 CEP112Q8N8E3 955 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 AVL9Q8NBF6 648 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 LRRN4CLQ8ND94 238 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 PHC3Q8NDX5 983 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 OR10G6Q8NH81 332 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 WDR48Q8TAF3 677 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 NCSTNQ92542 709 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 LRRC39Q96DD0 335 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 CERS2Q96G23 380 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 BIRC8Q96P09 236 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 TCF12Q99081 682 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 TSSK1BQ9BXA7 367 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-222ENST00000478095 SEMA6CQ9H3T2 930 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 EPB41L5Q9HCM4 733 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 SLC40A1Q9NP59 571 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 DMGDHQ9UI17 866 aaKnown RBP10.03□□□□□ -0.8
HDAC6-222ENST00000478095 FBXO5Q9UKT4 447 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 ENTPD2Q9Y5L3 495 aa10.03□□□□□ -0.8
HDAC6-222ENST00000478095 FAM221BA6H8Z2 402 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 LILRA5A6NI73 299 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 F8W8V4 182 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 ZW10O43264 779 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 UBXN7O94888 489 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 HAUS5O94927 633 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 CPNE6O95741 557 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 ESR1P03372 595 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 MPOP05164 745 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 GSTM1P09488 218 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 PKMP14618 531 aaKnown RBP10.02□□□□□ -0.81
HDAC6-222ENST00000478095 CHRM3P20309 590 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 EPHA4P54764 986 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 INHBCP55103 352 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 GPLD1P80108 840 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 GSTM4Q03013 218 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 RPA4Q13156 261 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 PRKG2Q13237 762 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 TMED2Q15363 201 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 C3orf38Q5JPI3 329 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 SNAP47Q5SQN1 464 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 PHF19Q5T6S3 580 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 ZNF549Q6P9A3 640 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 ZNF449Q6P9G9 518 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 FOXR1Q6PIV2 292 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 CNSTQ6PJW8 725 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 ZNF574Q6ZN55 896 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-222ENST00000478095 PDZD3Q86UT5 571 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 PIM3Q86V86 326 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 SLITRK4Q8IW52 837 aa10.02□□□□□ -0.81
HDAC6-222ENST00000478095 LMNTD2Q8IXW0 634 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms