RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 ZNF140P52738 457 aaPredicted RBP11.35□□□□□ -0.59
VARS2-208ENST00000477052 PMS2P54278 862 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 ACY1Q03154 408 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 PRKG2Q13237 762 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 BCL7AQ4VC05 210 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 HIST2H2BCQ6DN03 193 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 ITPRIPL1Q6GPH6 555 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 CAPRIN2Q6IMN6 1127 aaKnown RBP11.35□□□□□ -0.59
VARS2-208ENST00000477052 TCTN3Q6NUS6 607 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 KLHL35Q6PF15 583 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 NAPRTQ6XQN6 538 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 ALG3Q92685 438 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 MIB2Q96AX9 1013 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 DCUN1D1Q96GG9 259 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 DNAJC1Q96KC8 554 aaKnown RBP11.35□□□□□ -0.59
VARS2-208ENST00000477052 FERD3LQ96RJ6 166 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 TBL1YQ9BQ87 522 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 OSBPL8Q9BZF1 889 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 KCND1Q9NSA2 647 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 LUZP4Q9P127 313 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 ACSL5Q9ULC5 683 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 FARSAQ9Y285 508 aaKnown RBP11.35□□□□□ -0.59
VARS2-208ENST00000477052 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.35□□□□□ -0.59
VARS2-208ENST00000477052 REXO2Q9Y3B8 237 aaKnown RBP11.35□□□□□ -0.59
VARS2-208ENST00000477052 PCDHGA6Q9Y5G7 932 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 PCDHA3Q9Y5H8 950 aa11.35□□□□□ -0.59
VARS2-208ENST00000477052 A0A0U1RQJ8 604 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 C5orf60A6NFR6 353 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 C21orf140B9A014 251 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 BTN3A1O00481 513 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 CPNE3O75131 537 aaKnown RBP11.34□□□□□ -0.59
VARS2-208ENST00000477052 ZBTB11O95625 1053 aaPredicted RBP11.34□□□□□ -0.59
VARS2-208ENST00000477052 MT-ND3P03897 115 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 ST6GAL1P15907 406 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 CDH3P22223 829 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 CTNNA2P26232 953 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 MC4RP32245 332 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 CTNNA1P35221 906 aaKnown RBP11.34□□□□□ -0.59
VARS2-208ENST00000477052 PTGIRP43119 386 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 LMAN1P49257 510 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 NAP1L1P55209 391 aaKnown RBP11.34□□□□□ -0.59
VARS2-208ENST00000477052 TUBB4BP68371 445 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 SEMA5AQ13591 1074 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 LAMB3Q13751 1172 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 TUBB2AQ13885 445 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 BRD3Q15059 726 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 SPA17Q15506 151 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 UGT8Q16880 541 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 PTCHD3Q3KNS1 767 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 NADK2Q4G0N4 442 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 ZRANB3Q5FWF4 1079 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 PLEKHS1Q5SXH7 462 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 TRIM73Q86UV7 250 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 CDKL3Q8IVW4 592 aaPredicted RBP11.34□□□□□ -0.59
VARS2-208ENST00000477052 NXPE1Q8N323 547 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 CLDN19Q8N6F1 224 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 OR1L3Q8NH93 324 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 LCN9Q8WX39 176 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 HGH1Q9BTY7 390 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 TUBB2BQ9BVA1 445 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 LACRTQ9GZZ8 138 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 PACSIN2Q9UNF0 486 aaPredicted RBP11.34□□□□□ -0.59
VARS2-208ENST00000477052 MED13Q9UHV7 2174 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 LRRK2Q5S007 2527 aa11.34□□□□□ -0.59
VARS2-208ENST00000477052 OR51F1A6NGY5 319 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 A6NL46 340 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 TMEM150CB9EJG8 249 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 LDB2O43679 373 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 METTL18O95568 372 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 CRTAMO95727 393 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 CTSBP07858 339 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 ATP1B2P14415 290 aaPredicted RBP11.33□□□□□ -0.6
VARS2-208ENST00000477052 ITGALP20701 1170 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 PRDX3P30048 256 aaKnown RBP11.33□□□□□ -0.6
VARS2-208ENST00000477052 PRLHRP49683 370 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 FOXL2P58012 376 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 RPS15P62841 145 aaKnown RBP11.33□□□□□ -0.6
VARS2-208ENST00000477052 PDE1BQ01064 536 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 RAPSNQ13702 412 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 PRPSAP1Q14558 356 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 POU6F1Q14863 301 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 SARM1Q6SZW1 724 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 RAD9BQ6WBX8 426 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 TAS2R42Q7RTR8 314 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 SERPINA9Q86WD7 417 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 GAS2L3Q86XJ1 694 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 KMT5CQ86Y97 462 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 TMEM151BQ8IW70 566 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 PIANPQ8IYJ0 282 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 ENDOVQ8N8Q3 282 aaKnown RBP11.33□□□□□ -0.6
VARS2-208ENST00000477052 FAM71DQ8N9W8 422 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 ACRBPQ8NEB7 543 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 HM13Q8TCT9 377 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 CLIP3Q96DZ5 547 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 LINC00615Q96LM1 132 aaPredicted RBP11.33□□□□□ -0.6
VARS2-208ENST00000477052 SPATA13Q96N96 652 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 CD180Q99467 661 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 COPS8Q99627 209 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 MFRPQ9BY79 579 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 OR52A5Q9H2C5 316 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms