RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 PEX10O60683 326 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 MED24O75448 989 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 RSL1D1O76021 490 aaKnown RBP6.76□□□□□ -1.33
LRCH3-215ENST00000476664 AKR7A3O95154 331 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 ZWINTO95229 277 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 TOP1P11387 765 aaKnown RBP6.76□□□□□ -1.33
LRCH3-215ENST00000476664 PRLRP16471 622 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 GNAZP19086 355 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 CCNCP24863 283 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 SFNP31947 248 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 MDH1P40925 334 aaKnown RBP6.76□□□□□ -1.33
LRCH3-215ENST00000476664 CENPAP49450 140 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 ZNF75DP51815 510 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 WDR5P61964 334 aaKnown RBP6.76□□□□□ -1.33
LRCH3-215ENST00000476664 E2F1Q01094 437 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 ITIH3Q06033 890 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 ELP6Q0PNE2 266 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 RIPK1Q13546 671 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 CYP1B1Q16678 543 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 UGCGQ16739 394 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 ME3Q16798 604 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 TCTN1Q2MV58 587 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 VWC2Q2TAL6 325 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 USP39Q53GS9 565 aaKnown RBP6.76□□□□□ -1.33
LRCH3-215ENST00000476664 BOLA3Q53S33 107 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 LCE2CQ5TA81 110 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 RIPPLY2Q5TAB7 128 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 TMEM198Q66K66 360 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 SLFN13Q68D06 897 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 AFTPHQ6ULP2 937 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 TRIM72Q6ZMU5 477 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 MDGA2Q7Z553 956 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 KLBQ86Z14 1044 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 OR8K5Q8NH50 307 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 NCOA7Q8NI08 942 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 OCC1Q8TAD7 63 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.76□□□□□ -1.33
LRCH3-215ENST00000476664 THRSPQ92748 146 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 LOXL4Q96JB6 756 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 THUMPD2Q9BTF0 503 aaKnown RBP6.76□□□□□ -1.33
LRCH3-215ENST00000476664 KATNB1Q9BVA0 655 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 FZD8Q9H461 694 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 CD93Q9NPY3 652 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 SERINC1Q9NRX5 453 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 FAM118AQ9NWS6 357 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 SMC3Q9UQE7 1217 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 XDHP47989 1333 aa6.76□□□□□ -1.33
LRCH3-215ENST00000476664 HELZ2Q9BYK8 2649 aaKnown RBP6.75□□□□□ -1.33
LRCH3-215ENST00000476664 MED23Q9ULK4 1368 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 A0A0B4J293 547 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 AP4M1O00189 453 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 ST8SIA3O43173 380 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 KIF1CO43896 1103 aaKnown RBP6.75□□□□□ -1.33
LRCH3-215ENST00000476664 GMFGO60234 142 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 CDC14BO60729 498 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 DIRAS3O95661 229 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 PDGFBP01127 241 aaPredicted RBP6.75□□□□□ -1.33
LRCH3-215ENST00000476664 TGFAP01135 160 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 FGBP02675 491 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 CYC1P08574 325 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 AREGP15514 252 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 SFPQP23246 707 aaKnown RBP eCLIP6.75□□□□□ -1.33
LRCH3-215ENST00000476664 GATA3P23771 443 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 DNASE1P24855 282 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 CHRNA3P32297 505 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 CYP2C18P33260 490 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 NBL1P41271 181 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 PRCPP42785 496 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 DIO1P49895 249 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 CLDN2P57739 230 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 TRA2BP62995 288 aaKnown RBP6.75□□□□□ -1.33
LRCH3-215ENST00000476664 DMWDQ09019 674 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 HSPB3Q12988 150 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 UGP2Q16851 508 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 SHROOM1Q2M3G4 852 aaPredicted RBP6.75□□□□□ -1.33
LRCH3-215ENST00000476664 ZNF792Q3KQV3 632 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 IFI44LQ53G44 452 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 RNASEH2BQ5TBB1 312 aaKnown RBP6.75□□□□□ -1.33
LRCH3-215ENST00000476664 LCTLQ6UWM7 567 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 ZBTB49Q6ZSB9 765 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 D2HGDHQ8N465 521 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 CERS5Q8N5B7 392 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 TXNDC5Q8NBS9 432 aaKnown RBP6.75□□□□□ -1.33
LRCH3-215ENST00000476664 EXOC6Q8TAG9 804 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 LRRC8CQ8TDW0 803 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 NXNL1Q96CM4 212 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 RNF31Q96EP0 1072 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 RRNAD1Q96FB5 475 aaKnown RBP6.75□□□□□ -1.33
LRCH3-215ENST00000476664 SAMD8Q96LT4 415 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 ADAD1Q96M93 576 aaKnown RBP6.75□□□□□ -1.33
LRCH3-215ENST00000476664 ADGRE3Q9BY15 652 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 RNPEPL1Q9HAU8 725 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 DDX4Q9NQI0 724 aaKnown RBP6.75□□□□□ -1.33
LRCH3-215ENST00000476664 LARSQ9P2J5 1176 aaKnown RBP6.75□□□□□ -1.33
LRCH3-215ENST00000476664 ANKMY1Q9P2S6 941 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 TRMT6Q9UJA5 497 aaKnown RBP6.75□□□□□ -1.33
LRCH3-215ENST00000476664 FZD4Q9ULV1 537 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 OAZ3Q9UMX2 235 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 ITM2BQ9Y287 266 aa6.75□□□□□ -1.33
LRCH3-215ENST00000476664 CAB39Q9Y376 341 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms