RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 NMBRP28336 390 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 MAGEA6P43360 314 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 NPY2RP49146 381 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 SH3BP2P78314 561 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 PRAMEP78395 509 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 CDK16Q00536 496 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 CACHD1Q5VU97 1274 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 ANKRD22Q5VYY1 191 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 NAPRTQ6XQN6 538 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 LDB1Q86U70 411 aaPredicted RBP20.63■□□□□ 0.89
LIME1-204ENST00000476183 ACTRT1Q8TDG2 376 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 KLHL6Q8WZ60 621 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 NRTNQ99748 197 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 SPRY4Q9C004 299 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 SYBUQ9NX95 663 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 BFARQ9NZS9 450 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 MARCH4Q9P2E8 410 aaPredicted RBP20.63■□□□□ 0.89
LIME1-204ENST00000476183 SNX12Q9UMY4 172 aa20.63■□□□□ 0.89
LIME1-204ENST00000476183 TEX51A0A1B0GUA7 166 aa20.62■□□□□ 0.89
LIME1-204ENST00000476183 GSTM1P09488 218 aa20.62■□□□□ 0.89
LIME1-204ENST00000476183 WT1P19544 449 aaPredicted RBP20.62■□□□□ 0.89
LIME1-204ENST00000476183 GSTM4Q03013 218 aa20.62■□□□□ 0.89
LIME1-204ENST00000476183 RPA4Q13156 261 aa20.62■□□□□ 0.89
LIME1-204ENST00000476183 FASTKD1Q53R41 847 aaKnown RBP20.62■□□□□ 0.89
LIME1-204ENST00000476183 LYPLAL1Q5VWZ2 237 aa20.62■□□□□ 0.89
LIME1-204ENST00000476183 CCDC137Q6PK04 289 aaKnown RBP20.62■□□□□ 0.89
LIME1-204ENST00000476183 CEACAM20Q6UY09 585 aa20.62■□□□□ 0.89
LIME1-204ENST00000476183 CERS6Q6ZMG9 384 aa20.62■□□□□ 0.89
LIME1-204ENST00000476183 NKD1Q969G9 470 aa20.62■□□□□ 0.89
LIME1-204ENST00000476183 TEFMQ96QE5 360 aaKnown RBP20.62■□□□□ 0.89
LIME1-204ENST00000476183 UBL7Q96S82 380 aaPredicted RBP20.62■□□□□ 0.89
LIME1-204ENST00000476183 NAP1L3Q99457 506 aaPredicted RBP20.62■□□□□ 0.89
LIME1-204ENST00000476183 HRASLS2Q9NWW9 162 aa20.62■□□□□ 0.89
LIME1-204ENST00000476183 SEMA5BQ9P283 1151 aa20.62■□□□□ 0.89
LIME1-204ENST00000476183 PCDHB11Q9Y5F2 797 aa20.62■□□□□ 0.89
LIME1-204ENST00000476183 HEBP2Q9Y5Z4 205 aa20.62■□□□□ 0.89
LIME1-204ENST00000476183 COLEC10Q9Y6Z7 277 aa20.62■□□□□ 0.89
LIME1-204ENST00000476183 IGHV5-51A0A0C4DH38 117 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 QSOX1O00391 747 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 KALRNO60229 2985 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 AVILO75366 819 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 TMEM63AO94886 807 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 CD151P48509 253 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 KRT33BQ14525 404 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 BRD3Q15059 726 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 MANEAQ5SRI9 462 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 KLHL35Q6PF15 583 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 PCSK4Q6UW60 755 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 CES3Q6UWW8 571 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 PHC3Q8NDX5 983 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 CPT1BQ92523 772 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 ELMO1Q92556 727 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 MFSD3Q96ES6 412 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 FERD3LQ96RJ6 166 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 MAP3K3Q99759 626 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 KIFC1Q9BW19 673 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 CATSPERZQ9NTU4 200 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 PILRAQ9UKJ1 303 aa20.61■□□□□ 0.89
LIME1-204ENST00000476183 SLC5A10A0PJK1 596 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 OR6C74A6NCV1 312 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 AP3B1O00203 1094 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 IFRD1O00458 451 aaPredicted RBP20.6■□□□□ 0.89
LIME1-204ENST00000476183 LIN7AO14910 233 aaPredicted RBP20.6■□□□□ 0.89
LIME1-204ENST00000476183 POLR1CO15160 346 aaPredicted RBP20.6■□□□□ 0.89
LIME1-204ENST00000476183 PHF2O75151 1096 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 FTH1P02794 183 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 OR56A5P0C7T3 313 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 NELFEP18615 380 aaKnown RBP20.6■□□□□ 0.89
LIME1-204ENST00000476183 ARNTP27540 789 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 NDUFS1P28331 727 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 ARCN1P48444 511 aaKnown RBP20.6■□□□□ 0.89
LIME1-204ENST00000476183 FOXM1Q08050 763 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 KIAA1614Q5VZ46 1190 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 CAND1Q86VP6 1230 aaKnown RBP20.6■□□□□ 0.89
LIME1-204ENST00000476183 OOSP2Q86WS3 158 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 MPP5Q8N3R9 675 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 ACVR1CQ8NER5 493 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 OR4E2Q8NGC2 313 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 LKAAEAR1Q8TD35 194 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 TFGQ92734 400 aaPredicted RBP20.6■□□□□ 0.89
LIME1-204ENST00000476183 RNF31Q96EP0 1072 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 SLC41A2Q96JW4 573 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 TTC1Q99614 292 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 MRM3Q9HC36 420 aaKnown RBP20.6■□□□□ 0.89
LIME1-204ENST00000476183 PYCARDQ9ULZ3 195 aa20.6■□□□□ 0.89
LIME1-204ENST00000476183 BHMG1C9JSJ3 638 aaPredicted RBP20.59■□□□□ 0.89
LIME1-204ENST00000476183 CES2O00748 559 aa20.59■□□□□ 0.89
LIME1-204ENST00000476183 CD3EAPO15446 510 aaKnown RBP20.59■□□□□ 0.89
LIME1-204ENST00000476183 RAD1O60671 282 aa20.59■□□□□ 0.89
LIME1-204ENST00000476183 ITGB6P18564 788 aa20.59■□□□□ 0.89
LIME1-204ENST00000476183 ACADLP28330 430 aa20.59■□□□□ 0.89
LIME1-204ENST00000476183 KPNA2P52292 529 aaKnown RBP20.59■□□□□ 0.89
LIME1-204ENST00000476183 BOP1Q14137 746 aaKnown RBP20.59■□□□□ 0.89
LIME1-204ENST00000476183 DNTTIP2Q5QJE6 756 aaKnown RBP20.59■□□□□ 0.89
LIME1-204ENST00000476183 TIPARPQ7Z3E1 657 aaKnown RBP20.59■□□□□ 0.89
LIME1-204ENST00000476183 ANP32BQ92688 251 aaKnown RBP20.59■□□□□ 0.89
LIME1-204ENST00000476183 PPM1MQ96MI6 270 aa20.59■□□□□ 0.89
LIME1-204ENST00000476183 OR6C1Q96RD1 312 aa20.59■□□□□ 0.89
LIME1-204ENST00000476183 ZPBPQ9BS86 351 aa20.59■□□□□ 0.89
LIME1-204ENST00000476183 MVB12BQ9H7P6 319 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms