RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 EML2O95834 649 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 SNRPAP09012 282 aaKnown RBP15.36■□□□□ 0.05
CPSF3-203ENST00000475482 GPR89BP0CG08 455 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 GCAP28676 217 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 CD1CP29017 333 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 GP5P40197 560 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 HADHAP40939 763 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 CLCNKAP51800 687 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 CSE1LP55060 971 aaKnown RBP15.36■□□□□ 0.05
CPSF3-203ENST00000475482 MAGOHP61326 146 aaKnown RBP15.36■□□□□ 0.05
CPSF3-203ENST00000475482 ACVR1Q04771 509 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 EFTUD2Q15029 972 aaKnown RBP eCLIP15.36■□□□□ 0.05
CPSF3-203ENST00000475482 SOWAHCQ53LP3 525 aaPredicted RBP15.36■□□□□ 0.05
CPSF3-203ENST00000475482 TNFAIP8L3Q5GJ75 292 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 GRTP1Q5TC63 336 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 ZNF574Q6ZN55 896 aaPredicted RBP15.36■□□□□ 0.05
CPSF3-203ENST00000475482 KIAA0408Q6ZU52 694 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 RAB11FIP2Q7L804 512 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 SFRP1Q8N474 314 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 TTC30BQ8N4P2 665 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 TMEM159Q96B96 161 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 ZBTB9Q96C00 473 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 MRRFQ96E11 262 aaKnown RBP15.36■□□□□ 0.05
CPSF3-203ENST00000475482 PLEKHG4BQ96PX9 1271 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 TRIM56Q9BRZ2 755 aaKnown RBP15.36■□□□□ 0.05
CPSF3-203ENST00000475482 DPH1Q9BZG8 443 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 STRADBQ9C0K7 418 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 SYNDIG1Q9H7V2 258 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 TRIM39Q9HCM9 518 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 EURLQ9NYK6 297 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 ATXN10Q9UBB4 475 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 PKP3Q9Y446 797 aa15.36■□□□□ 0.05
CPSF3-203ENST00000475482 FASNP49327 2511 aaKnown RBP15.35■□□□□ 0.05
CPSF3-203ENST00000475482 PRR19A6NJB7 356 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 RHPN2P1A8MT19 583 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 PFDN6O15212 129 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 TNFSF15O95150 251 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 ASMTLO95671 621 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 C1QAP02745 245 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 ERVK-10P10266 1014 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 HOXB3P14651 431 aaPredicted RBP15.35■□□□□ 0.05
CPSF3-203ENST00000475482 ZNF8P17098 575 aaPredicted RBP15.35■□□□□ 0.05
CPSF3-203ENST00000475482 NR1D1P20393 614 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 SPRP35270 261 aaPredicted RBP15.35■□□□□ 0.05
CPSF3-203ENST00000475482 UGT1A5P35504 534 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 OR1D5P58170 312 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 TUBB8Q3ZCM7 444 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 HSP90AA5PQ58FG0 334 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.35■□□□□ 0.05
CPSF3-203ENST00000475482 FBXO39Q8N4B4 442 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 SNRNP27Q8WVK2 155 aaKnown RBP15.35■□□□□ 0.05
CPSF3-203ENST00000475482 GLYATL1Q969I3 302 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 ALKBH8Q96BT7 664 aaKnown RBP15.35■□□□□ 0.05
CPSF3-203ENST00000475482 VPS35Q96QK1 796 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 SPATA16Q9BXB7 569 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 GPR63Q9BZJ6 419 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 CNOT10Q9H9A5 744 aaKnown RBP15.35■□□□□ 0.05
CPSF3-203ENST00000475482 NLE1Q9NVX2 485 aaPredicted RBP15.35■□□□□ 0.05
CPSF3-203ENST00000475482 ZNHIT2Q9UHR6 403 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 TMPRSS11EQ9UL52 423 aa15.35■□□□□ 0.05
CPSF3-203ENST00000475482 ZNF106Q9H2Y7 1883 aaKnown RBP15.34■□□□□ 0.05
CPSF3-203ENST00000475482 IGHV1OR21-1A0A087WYE8 117 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 CXorf49A8MYA2 514 aaPredicted RBP15.34■□□□□ 0.05
CPSF3-203ENST00000475482 STX7O15400 261 aaKnown RBP15.34■□□□□ 0.05
CPSF3-203ENST00000475482 ZW10O43264 779 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 GRID2O43424 1007 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 SLC25A14O95258 325 aaPredicted RBP15.34■□□□□ 0.05
CPSF3-203ENST00000475482 MT-ND3P03897 115 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 PPP2R2AP63151 447 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 CFHR1Q03591 330 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 TEDDM1Q5T9Z0 273 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 NEPROQ6NW34 567 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 IYDQ6PHW0 289 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 PACS1Q6VY07 963 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 ADGRG6Q86SQ4 1221 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 PIM3Q86V86 326 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 CNTN4Q8IWV2 1026 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 OR6P1Q8NGX9 317 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 SLC37A2Q8TED4 501 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 KCNE4Q8WWG9 221 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 ZNF778Q96MU6 729 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 BBC3Q96PG8 261 aaPredicted RBP15.34■□□□□ 0.05
CPSF3-203ENST00000475482 SMC6Q96SB8 1091 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 SEMA6CQ9H3T2 930 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 SARS2Q9NP81 518 aaKnown RBP15.34■□□□□ 0.05
CPSF3-203ENST00000475482 IARS2Q9NSE4 1012 aaKnown RBP15.34■□□□□ 0.05
CPSF3-203ENST00000475482 IL17CQ9P0M4 197 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 PDP2Q9P2J9 529 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 CTNNAL1Q9UBT7 734 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 TBC1D29Q9UFV1 150 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 PRKAB1Q9Y478 270 aa15.34■□□□□ 0.05
CPSF3-203ENST00000475482 CCDC78A2IDD5 438 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 NVLO15381 856 aaKnown RBP15.33■□□□□ 0.04
CPSF3-203ENST00000475482 PSMA3P25788 255 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 ALDH4A1P30038 563 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 HPDP32754 393 aaPredicted RBP15.33■□□□□ 0.04
CPSF3-203ENST00000475482 ARCN1P48444 511 aaKnown RBP15.33■□□□□ 0.04
CPSF3-203ENST00000475482 KHDC1Q4VXA5 237 aaKnown RBP15.33■□□□□ 0.04
CPSF3-203ENST00000475482 ZDHHC20Q5W0Z9 365 aa15.33■□□□□ 0.04
CPSF3-203ENST00000475482 MRNIPQ6NTE8 343 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms