RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 RBM20Q5T481 1227 aaKnown RBP17.73■□□□□ 0.43
SNRPB-203ENST00000474384 VRK3Q8IV63 474 aa17.73■□□□□ 0.43
SNRPB-203ENST00000474384 SPNS2Q8IVW8 549 aa17.73■□□□□ 0.43
SNRPB-203ENST00000474384 TRIM48Q8IWZ4 208 aa17.73■□□□□ 0.43
SNRPB-203ENST00000474384 PPM1NQ8N819 430 aa17.73■□□□□ 0.43
SNRPB-203ENST00000474384 NAT6Q93015 286 aa17.73■□□□□ 0.43
SNRPB-203ENST00000474384 ATXN7L3BQ96GX2 97 aa17.73■□□□□ 0.43
SNRPB-203ENST00000474384 C12orf66Q96MD2 445 aa17.73■□□□□ 0.43
SNRPB-203ENST00000474384 CCDC3Q9BQI4 270 aa17.73■□□□□ 0.43
SNRPB-203ENST00000474384 IMP3Q9NV31 184 aaKnown RBP17.73■□□□□ 0.43
SNRPB-203ENST00000474384 CDYLQ9Y232 598 aa17.73■□□□□ 0.43
SNRPB-203ENST00000474384 APOBEC2Q9Y235 224 aaKnown RBP17.73■□□□□ 0.43
SNRPB-203ENST00000474384 MED16Q9Y2X0 877 aa17.73■□□□□ 0.43
SNRPB-203ENST00000474384 MTHFD1P11586 935 aaKnown RBP17.72■□□□□ 0.43
SNRPB-203ENST00000474384 CLCN7P51798 805 aa17.72■□□□□ 0.43
SNRPB-203ENST00000474384 PMS2P54278 862 aa17.72■□□□□ 0.43
SNRPB-203ENST00000474384 VSNL1P62760 191 aa17.72■□□□□ 0.43
SNRPB-203ENST00000474384 ILKQ13418 452 aa17.72■□□□□ 0.43
SNRPB-203ENST00000474384 EFTUD2Q15029 972 aaKnown RBP eCLIP17.72■□□□□ 0.435e-8■■■□□ 16.3
SNRPB-203ENST00000474384 TMED2Q15363 201 aa17.72■□□□□ 0.43
SNRPB-203ENST00000474384 DUS1LQ6P1R4 473 aaKnown RBP17.72■□□□□ 0.43
SNRPB-203ENST00000474384 ZNF761Q86XN6 746 aaPredicted RBP17.72■□□□□ 0.43
SNRPB-203ENST00000474384 ZBTB2Q8N680 514 aa17.72■□□□□ 0.43
SNRPB-203ENST00000474384 GPATCH11Q8N954 259 aa17.72■□□□□ 0.43
SNRPB-203ENST00000474384 Q8N9G6 341 aaPredicted RBP17.72■□□□□ 0.43
SNRPB-203ENST00000474384 SIDT2Q8NBJ9 832 aaKnown RBP17.72■□□□□ 0.43
SNRPB-203ENST00000474384 KCNJ9Q92806 393 aa17.72■□□□□ 0.43
SNRPB-203ENST00000474384 GPR21Q99679 349 aa17.72■□□□□ 0.43
SNRPB-203ENST00000474384 SLC30A3Q99726 388 aa17.72■□□□□ 0.43
SNRPB-203ENST00000474384 STN1Q9H668 368 aaKnown RBP17.72■□□□□ 0.43
SNRPB-203ENST00000474384 RRAGDQ9NQL2 400 aaPredicted RBP17.72■□□□□ 0.43
SNRPB-203ENST00000474384 LATS2Q9NRM7 1088 aa17.72■□□□□ 0.43
SNRPB-203ENST00000474384 PCDHGA1Q9Y5H4 931 aa17.72■□□□□ 0.43
SNRPB-203ENST00000474384 SPEGQ15772 3267 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 ASXL3Q9C0F0 2248 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 IFRD1O00458 451 aaPredicted RBP17.71■□□□□ 0.43
SNRPB-203ENST00000474384 CASC3O15234 703 aaKnown RBP17.71■□□□□ 0.43
SNRPB-203ENST00000474384 SLCO2B1O94956 709 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 GP1BAP07359 652 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 PNLIPP16233 465 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 ALDH4A1P30038 563 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 CDKN2DP55273 166 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 OR1D5P58170 312 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 TIAL1Q01085 375 aaKnown RBP eCLIP17.71■□□□□ 0.43
SNRPB-203ENST00000474384 PLEKHS1Q5SXH7 462 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 HECTD2Q5U5R9 776 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 ZNF438Q7Z4V0 828 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 PDZD3Q86UT5 571 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 ZC3HC1Q86WB0 502 aaKnown RBP17.71■□□□□ 0.43
SNRPB-203ENST00000474384 SLC22A15Q8IZD6 547 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 PHC3Q8NDX5 983 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 UHMK1Q8TAS1 419 aaKnown RBP17.71■□□□□ 0.43
SNRPB-203ENST00000474384 MRRFQ96E11 262 aaKnown RBP17.71■□□□□ 0.43
SNRPB-203ENST00000474384 CPNE1Q99829 537 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 TXLNGYQ9BZA5 131 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 TXNDC16Q9P2K2 825 aa17.71■□□□□ 0.43
SNRPB-203ENST00000474384 B4GAT1O43505 415 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 VPS26AO75436 327 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 FAM155BO75949 473 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 DKK1O94907 266 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 ACADLP28330 430 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 CCL7P80098 99 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 ABRQ12979 859 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 DHRS13Q6UX07 377 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 TRMT10CQ7L0Y3 403 aaKnown RBP17.7■□□□□ 0.42
SNRPB-203ENST00000474384 DGLUCYQ7Z3D6 616 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 AVL9Q8NBF6 648 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 ACVR1CQ8NER5 493 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 GIMAP7Q8NHV1 300 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.7■□□□□ 0.42
SNRPB-203ENST00000474384 TFGQ92734 400 aaPredicted RBP17.7■□□□□ 0.42
SNRPB-203ENST00000474384 INPP5DQ92835 1189 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 SH3KBP1Q96B97 665 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 FERD3LQ96RJ6 166 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 CYTH2Q99418 400 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 SLC38A3Q99624 504 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 MCMBPQ9BTE3 642 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 FUT8Q9BYC5 575 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 ABCG4Q9H172 646 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 RHOJQ9H4E5 214 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 ACSS3Q9H6R3 686 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 SLC40A1Q9NP59 571 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 POT1Q9NUX5 634 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 TAS2R13Q9NYV9 303 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 TSR3Q9UJK0 312 aaKnown RBP17.7■□□□□ 0.42
SNRPB-203ENST00000474384 CORO1CQ9ULV4 474 aaPredicted RBP17.7■□□□□ 0.42
SNRPB-203ENST00000474384 VWA7Q9Y334 891 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 DHRS7Q9Y394 339 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 RP1P56715 2156 aa17.7■□□□□ 0.42
SNRPB-203ENST00000474384 FAM95CA0A1B0GW59 222 aa17.69■□□□□ 0.42
SNRPB-203ENST00000474384 RIPK2O43353 540 aa17.69■□□□□ 0.42
SNRPB-203ENST00000474384 OPA1O60313 960 aa17.69■□□□□ 0.42
SNRPB-203ENST00000474384 SAT1P21673 171 aa17.69■□□□□ 0.42
SNRPB-203ENST00000474384 GP5P40197 560 aa17.69■□□□□ 0.42
SNRPB-203ENST00000474384 GPR3P46089 330 aa17.69■□□□□ 0.42
SNRPB-203ENST00000474384 PGGT1BP53609 377 aa17.69■□□□□ 0.42
SNRPB-203ENST00000474384 E2F1Q01094 437 aa17.69■□□□□ 0.42
SNRPB-203ENST00000474384 GPR18Q14330 331 aa17.69■□□□□ 0.42
SNRPB-203ENST00000474384 KRT33BQ14525 404 aa17.69■□□□□ 0.42
SNRPB-203ENST00000474384 GBX1Q14549 363 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms