RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 LILRA5A6NI73 299 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 GPC4O75487 556 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 SPAG6O75602 509 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 CHRM3P20309 590 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 NDUFS1P28331 727 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 SSTR1P30872 391 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 GPLD1P80108 840 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 HSPA14Q0VDF9 509 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 SQSTM1Q13501 440 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 SPIDRQ14159 915 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 BRD3Q15059 726 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 HES3Q5TGS1 186 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 CNSTQ6PJW8 725 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 SLC22A15Q8IZD6 547 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 LRRN4CLQ8ND94 238 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 C9orf72Q96LT7 481 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 GFM1Q96RP9 751 aaKnown RBP20.31■□□□□ 0.84
TOP3A-204ENST00000472959 EPB41L1Q9H4G0 881 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 LATS2Q9NRM7 1088 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 KLHL42Q9P2K6 505 aa20.31■□□□□ 0.84
TOP3A-204ENST00000472959 A0A1W2PQM1 296 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 E5RI56 91 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 HYAL3O43820 417 aaPredicted RBP20.3■□□□□ 0.84
TOP3A-204ENST00000472959 NIPSNAP2O75323 286 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 SLCO2B1O94956 709 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 MT-CO3P00414 261 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 AHSGP02765 367 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 JUPP14923 745 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 ILF2Q12905 390 aaKnown RBP20.3■□□□□ 0.84
TOP3A-204ENST00000472959 KRT33BQ14525 404 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 PLEKHS1Q5SXH7 462 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 ZNF549Q6P9A3 640 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 RBM44Q6ZP01 1051 aaKnown RBP20.3■□□□□ 0.84
TOP3A-204ENST00000472959 CAPN12Q6ZSI9 719 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 SLC26A11Q86WA9 606 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 DCBLD1Q8N8Z6 715 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 OR10G6Q8NH81 332 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 TFGQ92734 400 aaPredicted RBP20.3■□□□□ 0.84
TOP3A-204ENST00000472959 CDKL2Q92772 493 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 KCNJ9Q92806 393 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 MVB12BQ9H7P6 319 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 LRRC4CQ9HCJ2 640 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 CORO1CQ9ULV4 474 aaPredicted RBP20.3■□□□□ 0.84
TOP3A-204ENST00000472959 WASF3Q9UPY6 502 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 CLCA2Q9UQC9 943 aa20.3■□□□□ 0.84
TOP3A-204ENST00000472959 CFAP20Q9Y6A4 193 aaKnown RBP20.3■□□□□ 0.84
TOP3A-204ENST00000472959 ZFC3H1O60293 1989 aaKnown RBP20.3■□□□□ 0.84
TOP3A-204ENST00000472959 ASXL3Q9C0F0 2248 aa20.29■□□□□ 0.84
TOP3A-204ENST00000472959 IGHV1OR21-1A0A087WYE8 117 aa20.29■□□□□ 0.84
TOP3A-204ENST00000472959 TCRBV9S1A1TA0A576 114 aa20.29■□□□□ 0.84
TOP3A-204ENST00000472959 CPNE6O95741 557 aa20.29■□□□□ 0.84
TOP3A-204ENST00000472959 ACADLP28330 430 aa20.29■□□□□ 0.84
TOP3A-204ENST00000472959 GABRB3P28472 473 aa20.29■□□□□ 0.84
TOP3A-204ENST00000472959 CD1CP29017 333 aa20.29■□□□□ 0.84
TOP3A-204ENST00000472959 ECHS1P30084 290 aa20.29■□□□□ 0.84
TOP3A-204ENST00000472959 GPX6P59796 221 aa20.29■□□□□ 0.84
TOP3A-204ENST00000472959 AMZ1Q400G9 498 aa20.29■□□□□ 0.84
TOP3A-204ENST00000472959 NAPRTQ6XQN6 538 aa20.29■□□□□ 0.84
TOP3A-204ENST00000472959 ZNF761Q86XN6 746 aaPredicted RBP20.29■□□□□ 0.84
TOP3A-204ENST00000472959 GRAMD1AQ96CP6 724 aa20.29■□□□□ 0.84
TOP3A-204ENST00000472959 AHCYL2Q96HN2 611 aaKnown RBP20.29■□□□□ 0.84
TOP3A-204ENST00000472959 DEPDC7Q96QD5 511 aa20.29■□□□□ 0.84
TOP3A-204ENST00000472959 DPYSL5Q9BPU6 564 aa20.29■□□□□ 0.84
TOP3A-204ENST00000472959 AARSD1Q9BTE6 412 aaKnown RBP20.29■□□□□ 0.84
TOP3A-204ENST00000472959 SYNDIG1Q9H7V2 258 aa20.29■□□□□ 0.84
TOP3A-204ENST00000472959 CDYLQ9Y232 598 aa20.29■□□□□ 0.84
TOP3A-204ENST00000472959 MED19A0JLT2 244 aaPredicted RBP20.28■□□□□ 0.84
TOP3A-204ENST00000472959 FAM221BA6H8Z2 402 aa20.28■□□□□ 0.84
TOP3A-204ENST00000472959 D6RAR5 112 aa20.28■□□□□ 0.84
TOP3A-204ENST00000472959 F7P08709 466 aaPredicted RBP20.28■□□□□ 0.84
TOP3A-204ENST00000472959 ATP5DP30049 168 aa20.28■□□□□ 0.84
TOP3A-204ENST00000472959 STX2P32856 288 aa20.28■□□□□ 0.84
TOP3A-204ENST00000472959 CSE1LP55060 971 aaKnown RBP20.28■□□□□ 0.84
TOP3A-204ENST00000472959 SHC2P98077 582 aa20.28■□□□□ 0.84
TOP3A-204ENST00000472959 FOXK2Q01167 660 aa20.28■□□□□ 0.84
TOP3A-204ENST00000472959 GPR18Q14330 331 aa20.28■□□□□ 0.84
TOP3A-204ENST00000472959 TTLL9Q3SXZ7 439 aa20.28■□□□□ 0.84
TOP3A-204ENST00000472959 TEX35Q5T0J7 233 aa20.28■□□□□ 0.84
TOP3A-204ENST00000472959 ZBTB2Q8N680 514 aa20.28■□□□□ 0.84
TOP3A-204ENST00000472959 EIF1ADQ8N9N8 165 aaKnown RBP20.28■□□□□ 0.84
TOP3A-204ENST00000472959 FERD3LQ96RJ6 166 aa20.28■□□□□ 0.84
TOP3A-204ENST00000472959 KIR3DX1Q9H7L2 352 aa20.28■□□□□ 0.84
TOP3A-204ENST00000472959 NFU1Q9UMS0 254 aa20.28■□□□□ 0.84
TOP3A-204ENST00000472959 NEUROG3Q9Y4Z2 214 aa20.28■□□□□ 0.84
TOP3A-204ENST00000472959 PRAMEF33A0A0G2JMD5 474 aa20.27■□□□□ 0.84
TOP3A-204ENST00000472959 TMX2-CTNND1H3BSU7 103 aa20.27■□□□□ 0.84
TOP3A-204ENST00000472959 DUX1O43812 170 aa20.27■□□□□ 0.84
TOP3A-204ENST00000472959 VPS26AO75436 327 aa20.27■□□□□ 0.84
TOP3A-204ENST00000472959 SKIV2L2P42285 1042 aaKnown RBP20.27■□□□□ 0.84
TOP3A-204ENST00000472959 CLCN7P51798 805 aa20.27■□□□□ 0.84
TOP3A-204ENST00000472959 GBX1Q14549 363 aa20.27■□□□□ 0.84
TOP3A-204ENST00000472959 UGT3A1Q6NUS8 523 aa20.27■□□□□ 0.84
TOP3A-204ENST00000472959 KLHL35Q6PF15 583 aa20.27■□□□□ 0.84
TOP3A-204ENST00000472959 STRA8Q7Z7C7 330 aa20.27■□□□□ 0.84
TOP3A-204ENST00000472959 PIM3Q86V86 326 aa20.27■□□□□ 0.84
TOP3A-204ENST00000472959 SCNM1Q9BWG6 230 aa20.27■□□□□ 0.84
TOP3A-204ENST00000472959 TBC1D10AQ9BXI6 508 aa20.27■□□□□ 0.84
TOP3A-204ENST00000472959 SLC17A6Q9P2U8 582 aa20.27■□□□□ 0.84
TOP3A-204ENST00000472959 ASF1AQ9Y294 204 aa20.27■□□□□ 0.84
TOP3A-204ENST00000472959 MED16Q9Y2X0 877 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms