RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 CFAP20Q9Y6A4 193 aaKnown RBP13.53□□□□□ -0.24
SMURF1-203ENST00000472627 DDX3YO15523 660 aaKnown RBP13.52□□□□□ -0.25
SMURF1-203ENST00000472627 FTLP02792 175 aaPredicted RBP13.52□□□□□ -0.25
SMURF1-203ENST00000472627 GZMAP12544 262 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 PBLDP30039 288 aaPredicted RBP13.52□□□□□ -0.25
SMURF1-203ENST00000472627 CASP6P55212 293 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 NFE2L1Q14494 772 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 PAFAH1B3Q15102 231 aaKnown RBP13.52□□□□□ -0.25
SMURF1-203ENST00000472627 PPP2R5EQ16537 467 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 ATP13A5Q4VNC0 1218 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 CCDC183Q5T5S1 534 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 PRAMEF13Q5VWM6 474 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 METRNLQ641Q3 311 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 FBXO38Q6PIJ6 1188 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 OR4E2Q8NGC2 313 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 ITLN2Q8WWU7 325 aaPredicted RBP13.52□□□□□ -0.25
SMURF1-203ENST00000472627 LCN9Q8WX39 176 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 POM121Q96HA1 1249 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 WWP1Q9H0M0 922 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 SRMSQ9H3Y6 488 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 CLSTN2Q9H4D0 955 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 ZBTB20Q9HC78 741 aaPredicted RBP13.52□□□□□ -0.25
SMURF1-203ENST00000472627 MYO1AQ9UBC5 1043 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 MTORP42345 2549 aa13.52□□□□□ -0.25
SMURF1-203ENST00000472627 TRGV8A0A0C4DH27 118 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 OR2B3O76000 313 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 PIRTP0C851 137 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 AKT1P31749 480 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 SSR1P43307 286 aaKnown RBP13.51□□□□□ -0.25
SMURF1-203ENST00000472627 LMAN1P49257 510 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 UBXN1Q04323 297 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 ITGA9Q13797 1035 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 PRKD1Q15139 912 aaPredicted RBP13.51□□□□□ -0.25
SMURF1-203ENST00000472627 INAQ16352 499 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 HADHQ16836 314 aaKnown RBP13.51□□□□□ -0.25
SMURF1-203ENST00000472627 ZNF385CQ66K41 422 aaPredicted RBP13.51□□□□□ -0.25
SMURF1-203ENST00000472627 NCBP2-AS2Q69YL0 99 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 RHBDD2Q6NTF9 364 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 RPUSD3Q6P087 351 aaKnown RBP13.51□□□□□ -0.25
SMURF1-203ENST00000472627 TMEM220Q6QAJ8 160 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 IGFL2Q6UWQ7 119 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 FAM83HQ6ZRV2 1179 aaPredicted RBP13.51□□□□□ -0.25
SMURF1-203ENST00000472627 PPP1R32Q7Z5V6 425 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 CDH24Q86UP0 819 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 MAP7D3Q8IWC1 876 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMURF1-203ENST00000472627 ACVR1CQ8NER5 493 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 CHTF18Q8WVB6 975 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 MAGEB10Q96LZ2 347 aaPredicted RBP13.51□□□□□ -0.25
SMURF1-203ENST00000472627 INSM2Q96T92 566 aaPredicted RBP13.51□□□□□ -0.25
SMURF1-203ENST00000472627 TRIM8Q9BZR9 551 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 IRAK4Q9NWZ3 460 aa13.51□□□□□ -0.25
SMURF1-203ENST00000472627 MED13LQ71F56 2210 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 OR2AG2A6NM03 316 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 LGALS16A8MUM7 142 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 C2orf74A8MZ97 194 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 CCL21O00585 134 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 MMP2P08253 660 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 MSH3P20585 1137 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 PRDX3P30048 256 aaKnown RBP13.5□□□□□ -0.25
SMURF1-203ENST00000472627 RBPJQ06330 500 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 PCSK7Q16549 785 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 C1orf189Q5VU69 101 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 DUS1LQ6P1R4 473 aaKnown RBP13.5□□□□□ -0.25
SMURF1-203ENST00000472627 XKRXQ6PP77 449 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 TMEM207Q6UWW9 146 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 GFRALQ6UXV0 394 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 NT5DC3Q86UY8 548 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 RASGEF1AQ8N9B8 481 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 DDHD1Q8NEL9 900 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 ENOX1Q8TC92 643 aaKnown RBP13.5□□□□□ -0.25
SMURF1-203ENST00000472627 DTX3LQ8TDB6 740 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.5□□□□□ -0.252e-7■■■■■ 62.8
SMURF1-203ENST00000472627 PPM1MQ96MI6 270 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 CCM2Q9BSQ5 444 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 PITPNM3Q9BZ71 974 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 LHPPQ9H008 270 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 TRABDQ9H4I3 376 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 IP6K2Q9UHH9 426 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 CDC23Q9UJX2 597 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 FBXL4Q9UKA2 621 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 MYO6Q9UM54 1294 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 CSAG2Q9Y5P2 127 aa13.5□□□□□ -0.25
SMURF1-203ENST00000472627 MGAT4DA6NG13 374 aa13.49□□□□□ -0.25
SMURF1-203ENST00000472627 PCDH17O14917 1159 aa13.49□□□□□ -0.25
SMURF1-203ENST00000472627 KCNN4O15554 427 aa13.49□□□□□ -0.25
SMURF1-203ENST00000472627 CD1EP15812 388 aa13.49□□□□□ -0.25
SMURF1-203ENST00000472627 TCF4P15884 667 aa13.49□□□□□ -0.25
SMURF1-203ENST00000472627 ST6GAL1P15907 406 aa13.49□□□□□ -0.25
SMURF1-203ENST00000472627 MMP11P24347 488 aa13.49□□□□□ -0.25
SMURF1-203ENST00000472627 HMGCLP35914 325 aa13.49□□□□□ -0.25
SMURF1-203ENST00000472627 SPAM1P38567 509 aa13.49□□□□□ -0.25
SMURF1-203ENST00000472627 SMSP52788 366 aa13.49□□□□□ -0.25
SMURF1-203ENST00000472627 CTSCP53634 463 aa13.49□□□□□ -0.25
SMURF1-203ENST00000472627 MMRN1Q13201 1228 aa13.49□□□□□ -0.25
SMURF1-203ENST00000472627 TESK1Q15569 626 aa13.49□□□□□ -0.25
SMURF1-203ENST00000472627 FNBP1LQ5T0N5 605 aa13.49□□□□□ -0.25
SMURF1-203ENST00000472627 CDKAL1Q5VV42 579 aa13.49□□□□□ -0.25
SMURF1-203ENST00000472627 TLDC1Q6P9B6 456 aa13.49□□□□□ -0.25
SMURF1-203ENST00000472627 ISLR2Q6UXK2 745 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms