RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 C17orf82Q86X59 251 aaPredicted RBP8.99□□□□□ -0.97
SMC4-213ENST00000472282 NAGSQ8N159 534 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 AGGF1Q8N302 714 aaeCLIP8.99□□□□□ -0.972e-85■■■■■ 286.7
SMC4-213ENST00000472282 BBOF1Q8ND07 529 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 DDHD1Q8NEL9 900 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 WDR48Q8TAF3 677 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 GDAP1Q8TB36 358 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 ZNF398Q8TD17 642 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 DTX3LQ8TDB6 740 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 HDAC10Q969S8 669 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 ZNF669Q96BR6 464 aaPredicted RBP8.99□□□□□ -0.97
SMC4-213ENST00000472282 MFSD3Q96ES6 412 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 LIN37Q96GY3 246 aaPredicted RBP8.99□□□□□ -0.97
SMC4-213ENST00000472282 SIGLEC10Q96LC7 697 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 PWWP2AQ96N64 755 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 TRIM56Q9BRZ2 755 aaKnown RBP8.99□□□□□ -0.97
SMC4-213ENST00000472282 KIFC1Q9BW19 673 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 KRTAP9-9Q9BYP9 154 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 KRTAP9-4Q9BYQ2 154 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 FAM96AQ9H5X1 160 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 RDH14Q9HBH5 336 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 MRM3Q9HC36 420 aaKnown RBP8.99□□□□□ -0.97
SMC4-213ENST00000472282 THSD1Q9NS62 852 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 TREX1Q9NSU2 369 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 SMOXQ9NWM0 555 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 GRHL1Q9NZI5 618 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 TAAR2Q9P1P5 351 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 WHRNQ9P202 907 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 LRIT1Q9P2V4 623 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 CRLS1Q9UJA2 301 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 ANAPC5Q9UJX4 755 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 SLC17A4Q9Y2C5 497 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 MAD1L1Q9Y6D9 718 aa8.99□□□□□ -0.97
SMC4-213ENST00000472282 ESYT3A0FGR9 886 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 SDR42E2A6NKP2 422 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 TMEM229AB2RXF0 380 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 NDC80O14777 642 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 PLD2O14939 933 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 PPM1DO15297 605 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 EML2O95834 649 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 GOT2P00505 430 aaKnown RBP8.98□□□□□ -0.97
SMC4-213ENST00000472282 IVLP07476 585 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 SLC5A2P31639 672 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 AKT1P31749 480 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 CCKBRP32239 447 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 INHBCP55103 352 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 ARL4CP56559 192 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 OR1D5P58170 312 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 CACNG1Q06432 222 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 ZFP36L1Q07352 338 aaKnown RBP8.98□□□□□ -0.97
SMC4-213ENST00000472282 GTF2H3Q13889 308 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 TGIF1Q15583 401 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 TRADDQ15628 312 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 HIF1AQ16665 826 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 BBS9Q3SYG4 887 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 DNAJC21Q5F1R6 531 aaKnown RBP8.98□□□□□ -0.97
SMC4-213ENST00000472282 LDLRAP1Q5SW96 308 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 ZNF468Q5VIY5 522 aaPredicted RBP8.98□□□□□ -0.97
SMC4-213ENST00000472282 AFTPHQ6ULP2 937 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 ZNF574Q6ZN55 896 aaPredicted RBP8.98□□□□□ -0.97
SMC4-213ENST00000472282 RAB11FIP2Q7L804 512 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 TAS2R42Q7RTR8 314 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 ADGRG6Q86SQ4 1221 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 SERPINA9Q86WD7 417 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 SLITRK4Q8IW52 837 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 NXPE1Q8N323 547 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 FBXO39Q8N4B4 442 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 ARL14Q8N4G2 192 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 LRRN4CLQ8ND94 238 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 OR6P1Q8NGX9 317 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 ZDHHC1Q8WTX9 485 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 PEX13Q92968 403 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 ULK4Q96C45 1275 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 GRAMD1AQ96CP6 724 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 CCDC97Q96F63 343 aaPredicted RBP8.98□□□□□ -0.97
SMC4-213ENST00000472282 OR2M4Q96R27 311 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 OR2AG1Q9H205 316 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 SEMA6CQ9H3T2 930 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 L2HGDHQ9H9P8 463 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 TRIM39Q9HCM9 518 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 TRNAU1APQ9NX07 287 aaKnown RBP8.98□□□□□ -0.97
SMC4-213ENST00000472282 VPS18Q9P253 973 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 ATXN10Q9UBB4 475 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 PRKAB1Q9Y478 270 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 ANKRD12Q6UB98 2062 aa8.98□□□□□ -0.97
SMC4-213ENST00000472282 TRBV23OR9-2A0A075B6M9 112 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 TRBV5-4A0A0C4DH59 114 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 TEX51A0A1B0GUA7 166 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 FAM237BA0A1B0GVD1 139 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 AGAP14A8MT82 685 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 EFSO43281 561 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 NUDT21O43809 227 aaKnown RBP8.97□□□□□ -0.97
SMC4-213ENST00000472282 NUAK1O60285 661 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 DNAJC6O75061 913 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 ITGA2BP08514 1039 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 PNLIPP16233 465 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 ZNF8P17098 575 aaPredicted RBP8.97□□□□□ -0.97
SMC4-213ENST00000472282 MSH3P20585 1137 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 ALAS2P22557 587 aa8.97□□□□□ -0.97
SMC4-213ENST00000472282 ACRV1P26436 265 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms