RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 MED4Q9NPJ6 270 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 PRDM8Q9NQV8 689 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 SLC17A7Q9P2U7 560 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 TBC1D29Q9UFV1 150 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 EMCNQ9ULC0 261 aa18.79■□□□□ 0.6
PSPC1-203ENST00000471658 SMG5Q9UPR3 1016 aaKnown RBP18.79■□□□□ 0.6
PSPC1-203ENST00000471658 NPEPPSL1A6NEC2 478 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 H3BM21 787 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 SDC3O75056 442 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 CBSLP0DN79 551 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 COL6A2P12110 1019 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 VCLP18206 1134 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 RPA3P35244 121 aaPredicted RBP18.78■□□□□ 0.6
PSPC1-203ENST00000471658 CBSP35520 551 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 BLKP51451 505 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 IRX4P78413 519 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 GRIK2Q13002 908 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 GPS2Q13227 327 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 TRIM61Q5EBN2 209 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 N4BP2L1Q5TBK1 243 aaPredicted RBP18.78■□□□□ 0.6
PSPC1-203ENST00000471658 ISCA2Q86U28 154 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 CFAP61Q8NHU2 1237 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 TCP10LQ8TDR4 215 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 LMX1AQ8TE12 382 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 LOXL4Q96JB6 756 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 CAPN10Q9HC96 672 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 FAM86C1Q9NVL1 165 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 SCHIP1Q9P0W5 487 aaPredicted RBP18.78■□□□□ 0.6
PSPC1-203ENST00000471658 DCDC2Q9UHG0 476 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 ADAMTS6Q9UKP5 1117 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 RAB23Q9ULC3 237 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 DNAH14Q0VDD8 3507 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 MYO15AQ9UKN7 3530 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 BTN3A1O00481 513 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 KCNJ13O60928 360 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 TFEBP19484 476 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 HOXD12P35452 270 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 MPLP40238 635 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 SLC26A3P40879 764 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 CCT5P48643 541 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 CLCNKAP51800 687 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 ILF3Q12906 894 aaKnown RBP eCLIP18.78■□□□□ 0.62e-6■■■□□ 19.1
PSPC1-203ENST00000471658 BNIP3Q12983 259 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 LRP8Q14114 963 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 SHBQ15464 509 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 OR4D1Q15615 310 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 TSNQ15631 228 aaKnown RBP18.78■□□□□ 0.6
PSPC1-203ENST00000471658 FAM83EQ2M2I3 478 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 AGAP9Q5VTM2 703 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 TAF8Q7Z7C8 310 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 MYO1HQ8N1T3 1032 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 CEP76Q8TAP6 659 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 DLG3Q92796 817 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 ALKBH8Q96BT7 664 aaKnown RBP18.78■□□□□ 0.6
PSPC1-203ENST00000471658 SCYL1Q96KG9 808 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 SELENOSQ9BQE4 189 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 ALG9Q9H6U8 611 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 NMRAL1Q9HBL8 299 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 UCKL1Q9NWZ5 548 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 MKS1Q9NXB0 559 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 SLC6A14Q9UN76 642 aa18.78■□□□□ 0.6
PSPC1-203ENST00000471658 CFAP20Q9Y6A4 193 aaKnown RBP18.78■□□□□ 0.6
PSPC1-203ENST00000471658 TDRD6O60522 2096 aaKnown RBP18.77■□□□□ 0.6
PSPC1-203ENST00000471658 TRBV23OR9-2A0A075B6M9 112 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 PDZK1P1A8MUH7 402 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 GLRA3O75311 464 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 MPC1LP0DKB6 136 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 ENO3P13929 434 aaPredicted RBP18.77■□□□□ 0.6
PSPC1-203ENST00000471658 IDSP22304 550 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 ACADLP28330 430 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 IL9RQ01113 521 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 RPA4Q13156 261 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 CLCA4Q14CN2 919 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 LRRC8EQ6NSJ5 796 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 CCDC91Q7Z6B0 441 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 SFTPA2Q8IWL1 248 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 FSTL5Q8N475 847 aaPredicted RBP18.77■□□□□ 0.6
PSPC1-203ENST00000471658 TMEM151AQ8N4L1 468 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 ANKRD42Q8N9B4 389 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 SUMF1Q8NBK3 374 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 PHC3Q8NDX5 983 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 OR2I1PQ8NGU4 316 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 RMDN2Q96LZ7 410 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 ELF4Q99607 663 aaPredicted RBP18.77■□□□□ 0.6
PSPC1-203ENST00000471658 PRRX2Q99811 253 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 ZDHHC5Q9C0B5 715 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 DPEP2Q9H4A9 486 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 ERVMER34-1Q9H9K5 563 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 IL21RQ9HBE5 538 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 SSU72Q9NP77 194 aaKnown RBP18.77■□□□□ 0.6
PSPC1-203ENST00000471658 ACSL5Q9ULC5 683 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 PLLPQ9Y342 182 aa18.77■□□□□ 0.6
PSPC1-203ENST00000471658 LAMA1P25391 3075 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 TMEM120BA0PK00 339 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 KLHL33A6NCF5 533 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 KRT87PA6NCN2 255 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 GSTA1P08263 222 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 SBK3P0C264 359 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 HLA-BQ31612 363 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 CAPRIN2Q6IMN6 1127 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms