RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 GATA6Q92908 595 aa19.3■□□□□ 0.68
HDAC7-220ENST00000471235 RDH14Q9HBH5 336 aa19.3■□□□□ 0.68
HDAC7-220ENST00000471235 FBXO5Q9UKT4 447 aa19.3■□□□□ 0.68
HDAC7-220ENST00000471235 VPS9D1Q9Y2B5 631 aa19.3■□□□□ 0.68
HDAC7-220ENST00000471235 CRYL1Q9Y2S2 319 aa19.3■□□□□ 0.68
HDAC7-220ENST00000471235 EIF3HO15372 352 aaKnown RBP eCLIP19.29■□□□□ 0.68
HDAC7-220ENST00000471235 DUX1O43812 170 aa19.29■□□□□ 0.68
HDAC7-220ENST00000471235 NIPSNAP2O75323 286 aa19.29■□□□□ 0.68
HDAC7-220ENST00000471235 ESR1P03372 595 aa19.29■□□□□ 0.68
HDAC7-220ENST00000471235 CSE1LP55060 971 aaKnown RBP19.29■□□□□ 0.68
HDAC7-220ENST00000471235 ADARP55265 1226 aaKnown RBP19.29■□□□□ 0.68
HDAC7-220ENST00000471235 GUCY2DQ02846 1103 aa19.29■□□□□ 0.68
HDAC7-220ENST00000471235 CFHR1Q03591 330 aa19.29■□□□□ 0.68
HDAC7-220ENST00000471235 CLPPQ16740 277 aaPredicted RBP19.29■□□□□ 0.68
HDAC7-220ENST00000471235 ZNF449Q6P9G9 518 aa19.29■□□□□ 0.68
HDAC7-220ENST00000471235 TRMT10BQ6PF06 316 aaKnown RBP19.29■□□□□ 0.68
HDAC7-220ENST00000471235 USP53Q70EK8 1073 aa19.29■□□□□ 0.68
HDAC7-220ENST00000471235 SLITRK4Q8IW52 837 aa19.29■□□□□ 0.68
HDAC7-220ENST00000471235 ATXN7L3BQ96GX2 97 aa19.29■□□□□ 0.68
HDAC7-220ENST00000471235 PANX3Q96QZ0 392 aa19.29■□□□□ 0.68
HDAC7-220ENST00000471235 FOXP3Q9BZS1 431 aa19.29■□□□□ 0.68
HDAC7-220ENST00000471235 SAYSD1Q9NPB0 183 aa19.29■□□□□ 0.68
HDAC7-220ENST00000471235 SLC17A6Q9P2U8 582 aa19.29■□□□□ 0.68
HDAC7-220ENST00000471235 CDYLQ9Y232 598 aa19.29■□□□□ 0.68
HDAC7-220ENST00000471235 CEP295Q9C0D2 2601 aa19.28■□□□□ 0.68
HDAC7-220ENST00000471235 IFRD1O00458 451 aaPredicted RBP19.28■□□□□ 0.68
HDAC7-220ENST00000471235 PKMP14618 531 aaKnown RBP19.28■□□□□ 0.68
HDAC7-220ENST00000471235 AOAHP28039 575 aa19.28■□□□□ 0.68
HDAC7-220ENST00000471235 CD151P48509 253 aa19.28■□□□□ 0.68
HDAC7-220ENST00000471235 SQSTM1Q13501 440 aa19.28■□□□□ 0.68
HDAC7-220ENST00000471235 FRG1Q14331 258 aaKnown RBP19.28■□□□□ 0.68
HDAC7-220ENST00000471235 TMED2Q15363 201 aa19.28■□□□□ 0.68
HDAC7-220ENST00000471235 CNTN4Q8IWV2 1026 aa19.28■□□□□ 0.68
HDAC7-220ENST00000471235 C2CD4AQ8NCU7 369 aaPredicted RBP19.28■□□□□ 0.68
HDAC7-220ENST00000471235 JPH3Q8WXH2 748 aaPredicted RBP19.28■□□□□ 0.68
HDAC7-220ENST00000471235 TMEM159Q96B96 161 aa19.28■□□□□ 0.68
HDAC7-220ENST00000471235 AHCYL2Q96HN2 611 aaKnown RBP19.28■□□□□ 0.68
HDAC7-220ENST00000471235 TMEM74Q96NL1 305 aa19.28■□□□□ 0.68
HDAC7-220ENST00000471235 PHACTR1Q9C0D0 580 aa19.28■□□□□ 0.68
HDAC7-220ENST00000471235 ZMYND15Q9H091 742 aa19.28■□□□□ 0.68
HDAC7-220ENST00000471235 EPB41L1Q9H4G0 881 aa19.28■□□□□ 0.68
HDAC7-220ENST00000471235 ZDHHC18Q9NUE0 388 aa19.28■□□□□ 0.68
HDAC7-220ENST00000471235 OGFRQ9NZT2 677 aa19.28■□□□□ 0.68
HDAC7-220ENST00000471235 TMEM9Q9P0T7 183 aa19.28■□□□□ 0.68
HDAC7-220ENST00000471235 DMGDHQ9UI17 866 aaKnown RBP19.28■□□□□ 0.68
HDAC7-220ENST00000471235 HEBP2Q9Y5Z4 205 aa19.28■□□□□ 0.68
HDAC7-220ENST00000471235 H3BMM5 538 aa19.27■□□□□ 0.68
HDAC7-220ENST00000471235 GPC4O75487 556 aa19.27■□□□□ 0.68
HDAC7-220ENST00000471235 APOA4P06727 396 aa19.27■□□□□ 0.68
HDAC7-220ENST00000471235 CCKBRP32239 447 aa19.27■□□□□ 0.68
HDAC7-220ENST00000471235 PPM1FP49593 454 aaPredicted RBP19.27■□□□□ 0.68
HDAC7-220ENST00000471235 INHBCP55103 352 aa19.27■□□□□ 0.68
HDAC7-220ENST00000471235 ZFP36L1Q07352 338 aaKnown RBP19.27■□□□□ 0.68
HDAC7-220ENST00000471235 ZNF549Q6P9A3 640 aa19.27■□□□□ 0.68
HDAC7-220ENST00000471235 ZNF574Q6ZN55 896 aaPredicted RBP19.27■□□□□ 0.68
HDAC7-220ENST00000471235 PIM3Q86V86 326 aa19.27■□□□□ 0.68
HDAC7-220ENST00000471235 VRK3Q8IV63 474 aa19.27■□□□□ 0.68
HDAC7-220ENST00000471235 SLC22A15Q8IZD6 547 aa19.27■□□□□ 0.68
HDAC7-220ENST00000471235 SEMA6CQ9H3T2 930 aa19.27■□□□□ 0.68
HDAC7-220ENST00000471235 KIR3DX1Q9H7L2 352 aa19.27■□□□□ 0.68
HDAC7-220ENST00000471235 ANKRD12Q6UB98 2062 aa19.27■□□□□ 0.68
HDAC7-220ENST00000471235 A0A1W2PNU3 283 aaPredicted RBP19.26■□□□□ 0.67
HDAC7-220ENST00000471235 UBXN7O94888 489 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 PROS1P07225 676 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 HOXB3P14651 431 aaPredicted RBP19.26■□□□□ 0.67
HDAC7-220ENST00000471235 TYRP1P17643 537 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 ACADLP28330 430 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 CARSP49589 748 aaKnown RBP19.26■□□□□ 0.67
HDAC7-220ENST00000471235 PLOD1Q02809 727 aaPredicted RBP19.26■□□□□ 0.67
HDAC7-220ENST00000471235 HSPA14Q0VDF9 509 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 PLCL1Q15111 1095 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 GLE1Q53GS7 698 aaKnown RBP19.26■□□□□ 0.67
HDAC7-220ENST00000471235 CNSTQ6PJW8 725 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 CAPN12Q6ZSI9 719 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 OR4D9Q8NGE8 314 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 GABPB2Q8TAK5 448 aaPredicted RBP19.26■□□□□ 0.67
HDAC7-220ENST00000471235 GSDMBQ8TAX9 411 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 PYROXD1Q8WU10 500 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 ASZ1Q8WWH4 475 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 RSC1A1Q92681 617 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 FAM136AQ96C01 138 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 GRAMD1AQ96CP6 724 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 LIN37Q96GY3 246 aaPredicted RBP19.26■□□□□ 0.67
HDAC7-220ENST00000471235 CCDC74BQ96LY2 380 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 DPYSL5Q9BPU6 564 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 SLC24A2Q9UI40 661 aa19.26■□□□□ 0.67
HDAC7-220ENST00000471235 MN1Q10571 1320 aaPredicted RBP19.25■□□□□ 0.67
HDAC7-220ENST00000471235 IGHV5-10-1A0A0J9YXX1 117 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 TRABD2BA6NFA1 517 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 C1QTNF9BB2RNN3 333 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 HAUS5O94927 633 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 C1QTNF9P0C862 333 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 NDUFS1P28331 727 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 GABRB3P28472 473 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 CAPZBP47756 277 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 LEPRP48357 1165 aaKnown RBP19.25■□□□□ 0.67
HDAC7-220ENST00000471235 LIMK2P53671 638 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 KRT33BQ14525 404 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 PHF19Q5T6S3 580 aa19.25■□□□□ 0.67
HDAC7-220ENST00000471235 TEDDM1Q5T9Z0 273 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms